Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN7CQ9NUP9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.19■□□□□ 0.66
LIN7CQ9NUP9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LIN7CQ9NUP9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN7CQ9NUP9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.19■□□□□ 0.66
LIN7CQ9NUP9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.19■□□□□ 0.66
LIN7CQ9NUP9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIN7CQ9NUP9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LIN7CQ9NUP9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
LIN7CQ9NUP9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN7CQ9NUP9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.18■□□□□ 0.66
LIN7CQ9NUP9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LIN7CQ9NUP9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.18■□□□□ 0.66
LIN7CQ9NUP9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.18■□□□□ 0.66
LIN7CQ9NUP9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN7CQ9NUP9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 KRT18P10-201ENST00000388836 1287 ntBASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 AC004812.2-201ENST00000611079 2094 ntBASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN7CQ9NUP9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 AC129492.7-201ENST00000622992 756 ntBASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 DUSP8P5-201ENST00000422884 1815 ntBASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN7CQ9NUP9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIN7CQ9NUP9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN7CQ9NUP9 AC018755.3-202ENST00000596210 929 ntBASIC19.14■□□□□ 0.65
LIN7CQ9NUP9 AC012354.3-201ENST00000623734 483 ntBASIC19.14■□□□□ 0.65
LIN7CQ9NUP9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
LIN7CQ9NUP9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN7CQ9NUP9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN7CQ9NUP9 AC133561.1-201ENST00000568600 2415 ntBASIC19.13■□□□□ 0.65
LIN7CQ9NUP9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN7CQ9NUP9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN7CQ9NUP9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LIN7CQ9NUP9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN7CQ9NUP9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
LIN7CQ9NUP9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.13■□□□□ 0.65
LIN7CQ9NUP9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 DUX4L9-201ENST00000449051 1259 ntBASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 MIR6765-201ENST00000614092 87 ntBASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LIN7CQ9NUP9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 AC068473.5-201ENST00000616428 2072 ntBASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN7CQ9NUP9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
LIN7CQ9NUP9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.1■□□□□ 0.65
LIN7CQ9NUP9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LIN7CQ9NUP9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LIN7CQ9NUP9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.1■□□□□ 0.65
LIN7CQ9NUP9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.1■□□□□ 0.65
LIN7CQ9NUP9 ABCB10P4-201ENST00000566803 2184 ntBASIC19.1■□□□□ 0.65
LIN7CQ9NUP9 HLA-L-211ENST00000482052 1765 ntBASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms