Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.26■□□□□ 0.99
SDHAF3Q9NRP4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SDHAF3Q9NRP4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHAF3Q9NRP4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SDHAF3Q9NRP4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHAF3Q9NRP4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SDHAF3Q9NRP4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 AC137630.3-201ENST00000607245 391 ntBASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SDHAF3Q9NRP4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHAF3Q9NRP4 AC138932.3-201ENST00000567634 1902 ntBASIC21.24■□□□□ 0.99
SDHAF3Q9NRP4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHAF3Q9NRP4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.24■□□□□ 0.99
SDHAF3Q9NRP4 AL451085.2-201ENST00000605085 799 ntBASIC21.24■□□□□ 0.99
SDHAF3Q9NRP4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.24■□□□□ 0.99
SDHAF3Q9NRP4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHAF3Q9NRP4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SDHAF3Q9NRP4 AC009299.2-201ENST00000482477 511 ntBASIC21.23■□□□□ 0.99
SDHAF3Q9NRP4 Z92544.1-202ENST00000571933 1220 ntBASIC21.23■□□□□ 0.99
SDHAF3Q9NRP4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.23■□□□□ 0.99
SDHAF3Q9NRP4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SDHAF3Q9NRP4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
SDHAF3Q9NRP4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.22■□□□□ 0.99
SDHAF3Q9NRP4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.22■□□□□ 0.99
SDHAF3Q9NRP4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SDHAF3Q9NRP4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SDHAF3Q9NRP4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAF3Q9NRP4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAF3Q9NRP4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 KRT125P-201ENST00000546827 989 ntBASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAF3Q9NRP4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SDHAF3Q9NRP4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAF3Q9NRP4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHAF3Q9NRP4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.19■□□□□ 0.98
SDHAF3Q9NRP4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHAF3Q9NRP4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.19■□□□□ 0.98
SDHAF3Q9NRP4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHAF3Q9NRP4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
SDHAF3Q9NRP4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
SDHAF3Q9NRP4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 AL035685.1-201ENST00000636663 812 ntBASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAF3Q9NRP4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 AF131216.4-201ENST00000638924 1588 ntBASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAF3Q9NRP4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 HLA-L-211ENST00000482052 1765 ntBASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 AC239859.2-201ENST00000444165 318 ntBASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms