Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB16Q9NRJ7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB16Q9NRJ7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB16Q9NRJ7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB16Q9NRJ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB16Q9NRJ7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB16Q9NRJ7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDHB16Q9NRJ7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB16Q9NRJ7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB16Q9NRJ7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB16Q9NRJ7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB16Q9NRJ7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB16Q9NRJ7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB16Q9NRJ7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB16Q9NRJ7 AL024507.2-201ENST00000606070 2574 ntBASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB16Q9NRJ7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB16Q9NRJ7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB16Q9NRJ7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB16Q9NRJ7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHB16Q9NRJ7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB16Q9NRJ7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB16Q9NRJ7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB16Q9NRJ7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB16Q9NRJ7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 RAP2CP1-202ENST00000605179 643 ntBASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB16Q9NRJ7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 GPX1-201ENST00000419349 1106 ntBASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB16Q9NRJ7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB16Q9NRJ7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB16Q9NRJ7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
PCDHB16Q9NRJ7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
PCDHB16Q9NRJ7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB16Q9NRJ7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 FOXO3B-201ENST00000395675 1928 ntBASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB16Q9NRJ7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB16Q9NRJ7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB16Q9NRJ7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB16Q9NRJ7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB16Q9NRJ7 AC026202.3-201ENST00000600805 1127 ntBASIC19.89■□□□□ 0.77
PCDHB16Q9NRJ7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB16Q9NRJ7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB16Q9NRJ7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms