Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCRT2Q9NQ03 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SCRT2Q9NQ03 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCRT2Q9NQ03 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SCRT2Q9NQ03 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.18■□□□□ 0.34
SCRT2Q9NQ03 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SCRT2Q9NQ03 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 AL157400.5-201ENST00000507624 621 ntBASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 AL117328.2-201ENST00000624617 1940 ntBASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCRT2Q9NQ03 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCRT2Q9NQ03 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 MIR3960-201ENST00000583311 91 ntBASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.15■□□□□ 0.34
SCRT2Q9NQ03 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SCRT2Q9NQ03 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.14■□□□□ 0.33
SCRT2Q9NQ03 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCRT2Q9NQ03 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 LINC00565-201ENST00000562710 2331 ntBASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 AC004812.2-201ENST00000611079 2094 ntBASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.12■□□□□ 0.33
SCRT2Q9NQ03 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SCRT2Q9NQ03 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT2Q9NQ03 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms