Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.85■■□□□ 1.09
NEUROD4Q9HD90 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NEUROD4Q9HD90 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.85■■□□□ 1.09
NEUROD4Q9HD90 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.85■■□□□ 1.09
NEUROD4Q9HD90 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEUROD4Q9HD90 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEUROD4Q9HD90 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEUROD4Q9HD90 LONRF2P2-201ENST00000439212 571 ntBASIC21.84■■□□□ 1.09
NEUROD4Q9HD90 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.83■■□□□ 1.09
NEUROD4Q9HD90 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NEUROD4Q9HD90 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.83■■□□□ 1.08
NEUROD4Q9HD90 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
NEUROD4Q9HD90 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NEUROD4Q9HD90 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEUROD4Q9HD90 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 TSPY13P-201ENST00000338964 914 ntBASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.81■■□□□ 1.08
NEUROD4Q9HD90 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEUROD4Q9HD90 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NEUROD4Q9HD90 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.78■■□□□ 1.08
NEUROD4Q9HD90 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 AC019171.1-201ENST00000601251 1056 ntBASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 AC011551.1-201ENST00000614101 683 ntBASIC21.77■■□□□ 1.08
NEUROD4Q9HD90 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NEUROD4Q9HD90 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NEUROD4Q9HD90 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 AL161729.1-201ENST00000604104 1402 ntBASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NEUROD4Q9HD90 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 ABCB10P4-201ENST00000566803 2184 ntBASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms