Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MSL2Q9HCI7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 AL035685.1-201ENST00000636663 812 ntBASIC19.88■□□□□ 0.77
MSL2Q9HCI7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MSL2Q9HCI7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 AP003733.4-201ENST00000623785 1697 ntBASIC19.87■□□□□ 0.77
MSL2Q9HCI7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSL2Q9HCI7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MSL2Q9HCI7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MSL2Q9HCI7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MSL2Q9HCI7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.86■□□□□ 0.77
MSL2Q9HCI7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MSL2Q9HCI7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.86■□□□□ 0.77
MSL2Q9HCI7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.86■□□□□ 0.77
MSL2Q9HCI7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MSL2Q9HCI7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MSL2Q9HCI7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.85■□□□□ 0.77
MSL2Q9HCI7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
MSL2Q9HCI7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MSL2Q9HCI7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MSL2Q9HCI7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MSL2Q9HCI7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 BX664725.1-201ENST00000438252 379 ntBASIC19.84■□□□□ 0.77
MSL2Q9HCI7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MSL2Q9HCI7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MSL2Q9HCI7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MSL2Q9HCI7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MSL2Q9HCI7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MSL2Q9HCI7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MSL2Q9HCI7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MSL2Q9HCI7 AC239859.2-201ENST00000444165 318 ntBASIC19.83■□□□□ 0.77
MSL2Q9HCI7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 AC137630.3-201ENST00000607245 391 ntBASIC19.82■□□□□ 0.76
MSL2Q9HCI7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 HLA-L-211ENST00000482052 1765 ntBASIC19.82■□□□□ 0.76
MSL2Q9HCI7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSL2Q9HCI7 AF131216.4-201ENST00000638924 1588 ntBASIC19.82■□□□□ 0.76
MSL2Q9HCI7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.81■□□□□ 0.76
MSL2Q9HCI7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSL2Q9HCI7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSL2Q9HCI7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MSL2Q9HCI7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSL2Q9HCI7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSL2Q9HCI7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
MSL2Q9HCI7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.79■□□□□ 0.76
MSL2Q9HCI7 KRT125P-201ENST00000546827 989 ntBASIC19.79■□□□□ 0.76
MSL2Q9HCI7 Z92544.1-202ENST00000571933 1220 ntBASIC19.79■□□□□ 0.76
MSL2Q9HCI7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSL2Q9HCI7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.78■□□□□ 0.76
MSL2Q9HCI7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
MSL2Q9HCI7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms