Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 FYTTD1-209ENST00000494309 719 ntTSL 54.59□□□□□ -1.676e-9■■■■■ 36
XRN2Q9H0D6 FYTTD1-207ENST00000428738 718 ntTSL 54.46□□□□□ -1.76e-9■■■■■ 36
XRN2Q9H0D6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.876e-9■■■■■ 36
XRN2Q9H0D6 HELZ-209ENST00000580963 520 ntTSL 33.13□□□□□ -1.916e-9■■■■■ 36
XRN2Q9H0D6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.074e-15■■■■■ 36
XRN2Q9H0D6 PPARA-206ENST00000440343 368 ntTSL 1 (best)33.18■■■□□ 2.95e-6■■■■■ 35.9
XRN2Q9H0D6 PPARA-207ENST00000460086 433 ntTSL 1 (best)27.95■■■□□ 2.065e-6■■■■■ 35.9
XRN2Q9H0D6 PPARA-204ENST00000415785 531 ntTSL 419.16■□□□□ 0.665e-6■■■■■ 35.9
XRN2Q9H0D6 PPARA-205ENST00000420804 572 ntTSL 217.69■□□□□ 0.425e-6■■■■■ 35.9
XRN2Q9H0D6 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.125e-6■■■■■ 35.9
XRN2Q9H0D6 FAU-208ENST00000531357 1484 nt23.31■■□□□ 1.326e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.316e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.866e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.566e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-204ENST00000526555 507 ntTSL 518.44■□□□□ 0.546e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.63■□□□□ 0.256e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-201ENST00000279259 461 ntTSL 2 BASIC15.68■□□□□ 0.16e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC13.97□□□□□ -0.176e-7■■■■■ 35.9
XRN2Q9H0D6 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.63□□□□□ -1.196e-7■■■■■ 35.9
XRN2Q9H0D6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.34■■□□□ 1.176e-9■■■■■ 35.7
XRN2Q9H0D6 PLCB1-214ENST00000626161 706 ntTSL 518.81■□□□□ 0.66e-9■■■■■ 35.7
XRN2Q9H0D6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.2□□□□□ -0.146e-9■■■■■ 35.7
XRN2Q9H0D6 VARS-223ENST00000474643 885 ntTSL 518.17■□□□□ 0.53e-6■■■■■ 35.6
XRN2Q9H0D6 PCSK6-208ENST00000559417 1035 ntTSL 521.97■■□□□ 1.118e-7■■■■■ 35.6
XRN2Q9H0D6 KLF11-204ENST00000448523 559 ntTSL 416.29■□□□□ 0.22e-6■■■■■ 35.6
XRN2Q9H0D6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.172e-6■■■■■ 35.6
XRN2Q9H0D6 BRD4-204ENST00000594066 587 ntTSL 314.84□□□□□ -0.031e-6■■■■■ 35.6
XRN2Q9H0D6 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.632e-6■■■■■ 35.6
XRN2Q9H0D6 KLF11-202ENST00000401510 614 ntTSL 310.23□□□□□ -0.772e-6■■■■■ 35.6
XRN2Q9H0D6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.662e-17■■■■■ 35.5
XRN2Q9H0D6 RAP1GAP-203ENST00000374757 1328 ntTSL 528.76■■■□□ 2.197e-7■■■■■ 35.4
XRN2Q9H0D6 SH3TC1-217ENST00000509119 509 ntTSL 321.38■■□□□ 1.012e-6■■■■■ 35.4
XRN2Q9H0D6 SH3TC1-207ENST00000503284 560 ntTSL 419.61■□□□□ 0.732e-6■■■■■ 35.4
XRN2Q9H0D6 SH3TC1-203ENST00000457650 617 ntTSL 519.44■□□□□ 0.72e-6■■■■■ 35.4
XRN2Q9H0D6 SH3TC1-219ENST00000510763 543 ntTSL 418.34■□□□□ 0.532e-6■■■■■ 35.4
XRN2Q9H0D6 CFLAR-211ENST00000439154 1310 ntTSL 1 (best)19.82■□□□□ 0.767e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.517e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.98■□□□□ 0.477e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.74■□□□□ 0.437e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.67■□□□□ 0.427e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.067e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-202ENST00000340870 963 ntTSL 5 BASIC12.96□□□□□ -0.337e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-215ENST00000457277 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.777e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.05□□□□□ -1.127e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.137e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.72□□□□□ -1.177e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.3□□□□□ -1.47e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-220ENST00000470178 516 ntTSL 26.2□□□□□ -1.427e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-217ENST00000461422 717 ntTSL 25.76□□□□□ -1.497e-8■■■■■ 35.4
XRN2Q9H0D6 CFLAR-219ENST00000462763 588 ntTSL 24.55□□□□□ -1.687e-8■■■■■ 35.4
XRN2Q9H0D6 PDS5B-207ENST00000482955 581 ntTSL 325.38■■□□□ 1.659e-7■■■■■ 35.4
XRN2Q9H0D6 PDS5B-208ENST00000493653 972 ntTSL 1 (best)14.28□□□□□ -0.129e-7■■■■■ 35.4
XRN2Q9H0D6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.619e-7■■■■■ 35.4
XRN2Q9H0D6 PDS5B-204ENST00000466078 1889 ntTSL 23.77□□□□□ -1.819e-7■■■■■ 35.4
XRN2Q9H0D6 PDS5B-209ENST00000498550 4238 ntTSL 1 (best)3.77□□□□□ -1.819e-7■■■■■ 35.4
XRN2Q9H0D6 PDS5B-203ENST00000450460 5246 ntTSL 1 (best)3.53□□□□□ -1.849e-7■■■■■ 35.4
XRN2Q9H0D6 ANKRD11-212ENST00000567699 412 ntTSL 518.26■□□□□ 0.513e-6■■■■■ 35.4
XRN2Q9H0D6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.175e-8■■■■■ 35.4
XRN2Q9H0D6 ATF5-204ENST00000597227 828 ntTSL 320.14■□□□□ 0.813e-7■■■■■ 35.1
XRN2Q9H0D6 KLF11-203ENST00000440320 653 ntTSL 226.39■■□□□ 1.826e-8■■■■■ 35.1
XRN2Q9H0D6 VHL-203ENST00000477538 958 ntTSL 1 (best)18.21■□□□□ 0.519e-8■■■■■ 35.1
XRN2Q9H0D6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.03■□□□□ 0.329e-8■■■■■ 35.1
XRN2Q9H0D6 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.39e-8■■■■■ 35.1
XRN2Q9H0D6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15□□□□□ -0.012e-7■■■■■ 35.1
XRN2Q9H0D6 C9orf3-206ENST00000428313 2288 ntTSL 1 (best)14.92□□□□□ -0.022e-7■■■■■ 35.1
XRN2Q9H0D6 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.462e-7■■■■■ 35.1
XRN2Q9H0D6 UBQLN4-203ENST00000472638 654 ntTSL 523.58■■□□□ 1.375e-6■■■■■ 35.1
XRN2Q9H0D6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.485e-6■■■■■ 35.1
XRN2Q9H0D6 C9orf3-215ENST00000478473 895 ntTSL 327.88■■■□□ 2.052e-7■■■■■ 35.1
XRN2Q9H0D6 C9orf3-213ENST00000471978 478 ntTSL 227.19■■□□□ 1.942e-7■■■■■ 35.1
XRN2Q9H0D6 C9orf3-211ENST00000463372 919 ntTSL 317.58■□□□□ 0.42e-7■■■■■ 35.1
XRN2Q9H0D6 AGAP1-203ENST00000402604 563 ntTSL 415.45■□□□□ 0.065e-17■■■■■ 35
XRN2Q9H0D6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.01■■□□□ 1.113e-9■■■■■ 35
XRN2Q9H0D6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.523e-9■■■■■ 35
XRN2Q9H0D6 JMJD1C-211ENST00000633035 499 ntTSL 319.54■□□□□ 0.724e-8■■■■■ 35
XRN2Q9H0D6 CALM2-207ENST00000484408 682 ntTSL 523.32■■□□□ 1.324e-17■■■■■ 34.9
XRN2Q9H0D6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.154e-17■■■■■ 34.9
XRN2Q9H0D6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.59■■□□□ 1.054e-17■■■■■ 34.9
XRN2Q9H0D6 CALM2-208ENST00000489742 522 ntTSL 318.9■□□□□ 0.624e-17■■■■■ 34.9
XRN2Q9H0D6 CALM2-203ENST00000432899 1004 ntTSL 516.58■□□□□ 0.244e-17■■■■■ 34.9
XRN2Q9H0D6 CALM2-202ENST00000409563 770 ntTSL 5 BASIC12.15□□□□□ -0.464e-17■■■■■ 34.9
XRN2Q9H0D6 STPG4-206ENST00000422269 983 ntTSL 212.06□□□□□ -0.484e-17■■■■■ 34.9
XRN2Q9H0D6 CALM2-204ENST00000456319 703 ntTSL 24.95□□□□□ -1.624e-17■■■■■ 34.9
XRN2Q9H0D6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.914e-8■■■■■ 34.9
XRN2Q9H0D6 ATP13A3-205ENST00000457986 490 ntTSL 329.7■■■□□ 2.351e-16■■■■■ 34.8
XRN2Q9H0D6 PTK2-251ENST00000523797 405 ntTSL 327.27■■□□□ 1.963e-7■■■■■ 34.8
XRN2Q9H0D6 YWHAH-204ENST00000443669 822 ntTSL 327.18■■□□□ 1.942e-7■■■■■ 34.8
XRN2Q9H0D6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.762e-7■■■■■ 34.8
XRN2Q9H0D6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.3■■□□□ 1.642e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-257ENST00000524357 535 ntTSL 424.63■■□□□ 1.533e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-231ENST00000521332 630 ntTSL 422.69■■□□□ 1.223e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-254ENST00000524040 475 ntTSL 222.69■■□□□ 1.223e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.04■■□□□ 1.123e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-219ENST00000520045 602 ntTSL 422.04■■□□□ 1.123e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-218ENST00000519993 4388 ntTSL 1 (best)17.48■□□□□ 0.393e-7■■■■■ 34.8
XRN2Q9H0D6 YWHAH-206ENST00000479649 662 ntTSL 313.55□□□□□ -0.242e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.54□□□□□ -0.243e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-256ENST00000524257 430 ntTSL 412.6□□□□□ -0.393e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-214ENST00000519635 578 ntTSL 411.28□□□□□ -0.63e-7■■■■■ 34.8
XRN2Q9H0D6 ZNF827-208ENST00000513320 3165 ntTSL 1 (best) BASIC10.86□□□□□ -0.674e-6■■■■■ 34.8
Retrieved 100 of 21,068 protein–RNA pairs in 107.7 ms