RNA–Protein interactions for RNA: ENST00000580963.1

HELZ-209, Transcript of helicase with zinc finger, humanhuman

TSL 3

Gene HELZ, Length 520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELZ-209ENST00000580963 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
HELZ-209ENST00000580963 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
HELZ-209ENST00000580963 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
HELZ-209ENST00000580963 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
HELZ-209ENST00000580963 FOXD1Q16676 465 aa18.14■□□□□ 0.49
HELZ-209ENST00000580963 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
HELZ-209ENST00000580963 MSH5O43196 834 aa16.99■□□□□ 0.31
HELZ-209ENST00000580963 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
HELZ-209ENST00000580963 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
HELZ-209ENST00000580963 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
HELZ-209ENST00000580963 ADRA2BP18089 450 aa16.73■□□□□ 0.27
HELZ-209ENST00000580963 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
HELZ-209ENST00000580963 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
HELZ-209ENST00000580963 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
HELZ-209ENST00000580963 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
HELZ-209ENST00000580963 CACNB1Q02641 598 aaPredicted RBP14.74□□□□□ -0.05
HELZ-209ENST00000580963 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
HELZ-209ENST00000580963 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
HELZ-209ENST00000580963 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
HELZ-209ENST00000580963 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
HELZ-209ENST00000580963 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
HELZ-209ENST00000580963 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
HELZ-209ENST00000580963 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
HELZ-209ENST00000580963 NCBP3Q53F19 620 aaKnown RBP14.11□□□□□ -0.15
HELZ-209ENST00000580963 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
HELZ-209ENST00000580963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.96□□□□□ -0.172e-8■■■□□ 18.1
HELZ-209ENST00000580963 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
HELZ-209ENST00000580963 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
HELZ-209ENST00000580963 DSG3P32926 999 aa13.54□□□□□ -0.24
HELZ-209ENST00000580963 KCNA4P22459 653 aa13.52□□□□□ -0.25
HELZ-209ENST00000580963 CAPN15O75808 1086 aa13.51□□□□□ -0.25
HELZ-209ENST00000580963 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
HELZ-209ENST00000580963 POTEHQ6S545 545 aa13.29□□□□□ -0.28
HELZ-209ENST00000580963 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
HELZ-209ENST00000580963 ABCB7O75027 752 aa13.2□□□□□ -0.3
HELZ-209ENST00000580963 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
HELZ-209ENST00000580963 APLP2Q06481 763 aa13.16□□□□□ -0.3
HELZ-209ENST00000580963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
HELZ-209ENST00000580963 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
HELZ-209ENST00000580963 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
HELZ-209ENST00000580963 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
HELZ-209ENST00000580963 POLA2Q14181 598 aa12.86□□□□□ -0.35
HELZ-209ENST00000580963 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
HELZ-209ENST00000580963 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
HELZ-209ENST00000580963 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
HELZ-209ENST00000580963 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
HELZ-209ENST00000580963 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
HELZ-209ENST00000580963 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
HELZ-209ENST00000580963 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
HELZ-209ENST00000580963 ZBTB22O15209 634 aa12.45□□□□□ -0.42
HELZ-209ENST00000580963 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
HELZ-209ENST00000580963 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
HELZ-209ENST00000580963 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
HELZ-209ENST00000580963 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
HELZ-209ENST00000580963 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
HELZ-209ENST00000580963 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
HELZ-209ENST00000580963 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
HELZ-209ENST00000580963 HAX1O00165 279 aa12.18□□□□□ -0.46
HELZ-209ENST00000580963 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
HELZ-209ENST00000580963 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
HELZ-209ENST00000580963 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
HELZ-209ENST00000580963 EVX2Q03828 476 aa12.11□□□□□ -0.47
HELZ-209ENST00000580963 FBLN2P98095 1184 aa12.1□□□□□ -0.47
HELZ-209ENST00000580963 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
HELZ-209ENST00000580963 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
HELZ-209ENST00000580963 SSUH2Q9Y2M2 353 aa11.98□□□□□ -0.49
HELZ-209ENST00000580963 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
HELZ-209ENST00000580963 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
HELZ-209ENST00000580963 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
HELZ-209ENST00000580963 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
HELZ-209ENST00000580963 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
HELZ-209ENST00000580963 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
HELZ-209ENST00000580963 GABBR2O75899 941 aa11.77□□□□□ -0.53
HELZ-209ENST00000580963 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
HELZ-209ENST00000580963 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
HELZ-209ENST00000580963 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
HELZ-209ENST00000580963 LHX8Q68G74 356 aa11.59□□□□□ -0.55
HELZ-209ENST00000580963 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
HELZ-209ENST00000580963 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
HELZ-209ENST00000580963 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
HELZ-209ENST00000580963 CLCN6P51797 869 aa11.43□□□□□ -0.58
HELZ-209ENST00000580963 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
HELZ-209ENST00000580963 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
HELZ-209ENST00000580963 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
HELZ-209ENST00000580963 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
HELZ-209ENST00000580963 DCBLD2Q96PD2 775 aa11.34□□□□□ -0.59
HELZ-209ENST00000580963 EHMT2Q96KQ7 1210 aa11.32□□□□□ -0.6
HELZ-209ENST00000580963 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
HELZ-209ENST00000580963 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
HELZ-209ENST00000580963 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
HELZ-209ENST00000580963 POTEB2H3BUK9 544 aa11.18□□□□□ -0.62
HELZ-209ENST00000580963 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
HELZ-209ENST00000580963 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
HELZ-209ENST00000580963 OTUD5Q96G74 571 aa11.15□□□□□ -0.62
HELZ-209ENST00000580963 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
HELZ-209ENST00000580963 PROM2Q8N271 834 aa11.07□□□□□ -0.64
HELZ-209ENST00000580963 MS4A3Q96HJ5 214 aa11.06□□□□□ -0.64
HELZ-209ENST00000580963 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
HELZ-209ENST00000580963 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
HELZ-209ENST00000580963 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms