Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 AC060814.1-201ENST00000554326 538 ntBASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-1Q9BYR8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
KRTAP3-1Q9BYR8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 AL117328.2-201ENST00000624617 1940 ntBASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
KRTAP3-1Q9BYR8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC11.77□□□□□ -0.52
KRTAP3-1Q9BYR8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
KRTAP3-1Q9BYR8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
KRTAP3-1Q9BYR8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP3-1Q9BYR8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP3-1Q9BYR8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 AC092296.2-201ENST00000589470 999 ntBASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 AC016575.1-201ENST00000607026 382 ntBASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 EP400NL-214ENST00000641289 2402 ntBASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
KRTAP3-1Q9BYR8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 FOXO3B-201ENST00000395675 1928 ntBASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-1Q9BYR8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms