Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.33■□□□□ 0.69
PCGF1Q9BSM1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCGF1Q9BSM1 Z92544.1-202ENST00000571933 1220 ntBASIC19.33■□□□□ 0.68
PCGF1Q9BSM1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.33■□□□□ 0.68
PCGF1Q9BSM1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCGF1Q9BSM1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCGF1Q9BSM1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCGF1Q9BSM1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCGF1Q9BSM1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 GUSBP5-201ENST00000418136 578 ntBASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCGF1Q9BSM1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCGF1Q9BSM1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCGF1Q9BSM1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCGF1Q9BSM1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCGF1Q9BSM1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.31■□□□□ 0.68
PCGF1Q9BSM1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCGF1Q9BSM1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCGF1Q9BSM1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF1Q9BSM1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 MIR4281-201ENST00000580852 62 ntBASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 MIR4787-201ENST00000607364 84 ntBASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 AC011551.1-201ENST00000614101 683 ntBASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 AC142381.3-201ENST00000568208 1670 ntBASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF1Q9BSM1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF1Q9BSM1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.27■□□□□ 0.68
PCGF1Q9BSM1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.27■□□□□ 0.67
PCGF1Q9BSM1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 AC137630.3-201ENST00000607245 391 ntBASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF1Q9BSM1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF1Q9BSM1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF1Q9BSM1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF1Q9BSM1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.25■□□□□ 0.67
PCGF1Q9BSM1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCGF1Q9BSM1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF1Q9BSM1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.25■□□□□ 0.67
PCGF1Q9BSM1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms