Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RAB40CQ96S21 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40CQ96S21 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB40CQ96S21 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB40CQ96S21 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40CQ96S21 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RAB40CQ96S21 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.75■□□□□ 0.59
RAB40CQ96S21 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.75■□□□□ 0.59
RAB40CQ96S21 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40CQ96S21 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB40CQ96S21 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40CQ96S21 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40CQ96S21 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40CQ96S21 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAB40CQ96S21 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40CQ96S21 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40CQ96S21 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB40CQ96S21 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB40CQ96S21 MIR7108-201ENST00000614319 87 ntBASIC18.74■□□□□ 0.59
RAB40CQ96S21 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB40CQ96S21 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40CQ96S21 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40CQ96S21 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB40CQ96S21 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40CQ96S21 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB40CQ96S21 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAB40CQ96S21 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RAB40CQ96S21 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RAB40CQ96S21 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB40CQ96S21 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB40CQ96S21 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40CQ96S21 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB40CQ96S21 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40CQ96S21 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40CQ96S21 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40CQ96S21 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.72■□□□□ 0.59
RAB40CQ96S21 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40CQ96S21 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40CQ96S21 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB40CQ96S21 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
RAB40CQ96S21 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40CQ96S21 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB40CQ96S21 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB40CQ96S21 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB40CQ96S21 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40CQ96S21 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40CQ96S21 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB40CQ96S21 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB40CQ96S21 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40CQ96S21 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB40CQ96S21 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40CQ96S21 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40CQ96S21 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAB40CQ96S21 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40CQ96S21 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40CQ96S21 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40CQ96S21 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40CQ96S21 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40CQ96S21 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40CQ96S21 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40CQ96S21 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB40CQ96S21 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40CQ96S21 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40CQ96S21 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40CQ96S21 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB40CQ96S21 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40CQ96S21 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
RAB40CQ96S21 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB40CQ96S21 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAB40CQ96S21 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB40CQ96S21 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40CQ96S21 MIR3648-2-201ENST00000581792 180 ntBASIC18.68■□□□□ 0.58
RAB40CQ96S21 MIR3960-201ENST00000583311 91 ntBASIC18.68■□□□□ 0.58
RAB40CQ96S21 MIR3648-1-201ENST00000615959 180 ntBASIC18.68■□□□□ 0.58
RAB40CQ96S21 CR559946.2-201ENST00000623684 991 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms