Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
IFT43Q96FT9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IFT43Q96FT9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.81■■□□□ 1.4
IFT43Q96FT9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.8■■□□□ 1.4
IFT43Q96FT9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT43Q96FT9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT43Q96FT9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT43Q96FT9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.8■■□□□ 1.4
IFT43Q96FT9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT43Q96FT9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.79■■□□□ 1.4
IFT43Q96FT9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.79■■□□□ 1.4
IFT43Q96FT9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT43Q96FT9 AC138932.3-201ENST00000567634 1902 ntBASIC23.78■■□□□ 1.4
IFT43Q96FT9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT43Q96FT9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
IFT43Q96FT9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT43Q96FT9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT43Q96FT9 AL592295.1-201ENST00000400984 884 ntBASIC23.78■■□□□ 1.4
IFT43Q96FT9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
IFT43Q96FT9 AC022616.5-201ENST00000518796 181 ntBASIC23.78■■□□□ 1.4
IFT43Q96FT9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT43Q96FT9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT43Q96FT9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IFT43Q96FT9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IFT43Q96FT9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
IFT43Q96FT9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
IFT43Q96FT9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.77■■□□□ 1.4
IFT43Q96FT9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.77■■□□□ 1.4
IFT43Q96FT9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFT43Q96FT9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFT43Q96FT9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT43Q96FT9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IFT43Q96FT9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IFT43Q96FT9 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.76■■□□□ 1.39
IFT43Q96FT9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
IFT43Q96FT9 AC133561.1-201ENST00000568600 2415 ntBASIC23.76■■□□□ 1.39
IFT43Q96FT9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
IFT43Q96FT9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
IFT43Q96FT9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
IFT43Q96FT9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
IFT43Q96FT9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
IFT43Q96FT9 GUSBP5-201ENST00000418136 578 ntBASIC23.75■■□□□ 1.39
IFT43Q96FT9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT43Q96FT9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT43Q96FT9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT43Q96FT9 AP003733.4-201ENST00000623785 1697 ntBASIC23.74■■□□□ 1.39
IFT43Q96FT9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
IFT43Q96FT9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.74■■□□□ 1.39
IFT43Q96FT9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
IFT43Q96FT9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT43Q96FT9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IFT43Q96FT9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT43Q96FT9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
IFT43Q96FT9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.73■■□□□ 1.39
IFT43Q96FT9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IFT43Q96FT9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.73■■□□□ 1.39
IFT43Q96FT9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.73■■□□□ 1.39
IFT43Q96FT9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.73■■□□□ 1.39
IFT43Q96FT9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT43Q96FT9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IFT43Q96FT9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT43Q96FT9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.73■■□□□ 1.39
IFT43Q96FT9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
IFT43Q96FT9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFT43Q96FT9 Z92544.1-202ENST00000571933 1220 ntBASIC23.72■■□□□ 1.39
IFT43Q96FT9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
IFT43Q96FT9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFT43Q96FT9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFT43Q96FT9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.72■■□□□ 1.39
IFT43Q96FT9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFT43Q96FT9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
IFT43Q96FT9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IFT43Q96FT9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.71■■□□□ 1.39
IFT43Q96FT9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.71■■□□□ 1.39
IFT43Q96FT9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.71■■□□□ 1.39
IFT43Q96FT9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
IFT43Q96FT9 MIR6089-201ENST00000616698 64 ntBASIC23.71■■□□□ 1.39
IFT43Q96FT9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.71■■□□□ 1.39
IFT43Q96FT9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
IFT43Q96FT9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
IFT43Q96FT9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.71■■□□□ 1.39
IFT43Q96FT9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
IFT43Q96FT9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
IFT43Q96FT9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
IFT43Q96FT9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
IFT43Q96FT9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
IFT43Q96FT9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
IFT43Q96FT9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IFT43Q96FT9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
IFT43Q96FT9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.69■■□□□ 1.38
IFT43Q96FT9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
IFT43Q96FT9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
IFT43Q96FT9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms