Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPB3Q92617 MIR4449-201ENST00000578365 66 ntBASIC18.24■□□□□ 0.51
NPIPB3Q92617 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPB3Q92617 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB3Q92617 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.24■□□□□ 0.51
NPIPB3Q92617 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB3Q92617 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.23■□□□□ 0.51
NPIPB3Q92617 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.23■□□□□ 0.51
NPIPB3Q92617 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
NPIPB3Q92617 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.23■□□□□ 0.51
NPIPB3Q92617 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB3Q92617 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.23■□□□□ 0.51
NPIPB3Q92617 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB3Q92617 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB3Q92617 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NPIPB3Q92617 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB3Q92617 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.23■□□□□ 0.51
NPIPB3Q92617 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB3Q92617 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NPIPB3Q92617 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.22■□□□□ 0.51
NPIPB3Q92617 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NPIPB3Q92617 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NPIPB3Q92617 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.22■□□□□ 0.51
NPIPB3Q92617 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NPIPB3Q92617 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB3Q92617 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB3Q92617 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB3Q92617 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB3Q92617 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NPIPB3Q92617 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 DUSP8P5-201ENST00000422884 1815 ntBASIC18.21■□□□□ 0.51
NPIPB3Q92617 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB3Q92617 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB3Q92617 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB3Q92617 AC133552.2-201ENST00000619106 1032 ntBASIC18.21■□□□□ 0.51
NPIPB3Q92617 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPIPB3Q92617 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.21■□□□□ 0.51
NPIPB3Q92617 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB3Q92617 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB3Q92617 AC009831.1-201ENST00000580420 1582 ntBASIC18.21■□□□□ 0.51
NPIPB3Q92617 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB3Q92617 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPIPB3Q92617 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB3Q92617 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB3Q92617 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPIPB3Q92617 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB3Q92617 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.2■□□□□ 0.5
NPIPB3Q92617 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.2■□□□□ 0.5
NPIPB3Q92617 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NPIPB3Q92617 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB3Q92617 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB3Q92617 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NPIPB3Q92617 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPIPB3Q92617 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPB3Q92617 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPB3Q92617 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPB3Q92617 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NPIPB3Q92617 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPB3Q92617 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPB3Q92617 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPB3Q92617 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPB3Q92617 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPB3Q92617 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPB3Q92617 AC068473.5-201ENST00000616428 2072 ntBASIC18.18■□□□□ 0.5
NPIPB3Q92617 AC012676.1-201ENST00000574705 1949 ntBASIC18.18■□□□□ 0.5
NPIPB3Q92617 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPB3Q92617 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPB3Q92617 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NPIPB3Q92617 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.18■□□□□ 0.5
NPIPB3Q92617 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NPIPB3Q92617 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPIPB3Q92617 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.17■□□□□ 0.5
NPIPB3Q92617 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPB3Q92617 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB3Q92617 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB3Q92617 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB3Q92617 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB3Q92617 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms