Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.51■■□□□ 1.35
PTCD2Q8WV60 AL035685.1-201ENST00000636663 812 ntBASIC23.51■■□□□ 1.35
PTCD2Q8WV60 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD2Q8WV60 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PTCD2Q8WV60 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.5■■□□□ 1.35
PTCD2Q8WV60 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
PTCD2Q8WV60 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.5■■□□□ 1.35
PTCD2Q8WV60 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCD2Q8WV60 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
PTCD2Q8WV60 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD2Q8WV60 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 AL592295.1-201ENST00000400984 884 ntBASIC23.48■■□□□ 1.35
PTCD2Q8WV60 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD2Q8WV60 HLA-L-211ENST00000482052 1765 ntBASIC23.47■■□□□ 1.35
PTCD2Q8WV60 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 AC009299.2-201ENST00000482477 511 ntBASIC23.47■■□□□ 1.35
PTCD2Q8WV60 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD2Q8WV60 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTCD2Q8WV60 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.46■■□□□ 1.35
PTCD2Q8WV60 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.46■■□□□ 1.35
PTCD2Q8WV60 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.46■■□□□ 1.35
PTCD2Q8WV60 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTCD2Q8WV60 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.45■■□□□ 1.35
PTCD2Q8WV60 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCD2Q8WV60 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.45■■□□□ 1.34
PTCD2Q8WV60 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.45■■□□□ 1.34
PTCD2Q8WV60 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PTCD2Q8WV60 AL031848.2-201ENST00000607670 837 ntBASIC23.45■■□□□ 1.34
PTCD2Q8WV60 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCD2Q8WV60 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.44■■□□□ 1.34
PTCD2Q8WV60 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
PTCD2Q8WV60 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PTCD2Q8WV60 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTCD2Q8WV60 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.43■■□□□ 1.34
PTCD2Q8WV60 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PTCD2Q8WV60 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PTCD2Q8WV60 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.43■■□□□ 1.34
PTCD2Q8WV60 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCD2Q8WV60 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTCD2Q8WV60 AC090877.2-201ENST00000558441 1738 ntBASIC23.42■■□□□ 1.34
PTCD2Q8WV60 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.42■■□□□ 1.34
PTCD2Q8WV60 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTCD2Q8WV60 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PTCD2Q8WV60 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
PTCD2Q8WV60 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
PTCD2Q8WV60 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTCD2Q8WV60 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCD2Q8WV60 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCD2Q8WV60 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCD2Q8WV60 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCD2Q8WV60 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.41■■□□□ 1.34
PTCD2Q8WV60 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.41■■□□□ 1.34
PTCD2Q8WV60 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD2Q8WV60 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCD2Q8WV60 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCD2Q8WV60 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCD2Q8WV60 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
PTCD2Q8WV60 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PTCD2Q8WV60 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PTCD2Q8WV60 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.38■■□□□ 1.33
PTCD2Q8WV60 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PTCD2Q8WV60 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCD2Q8WV60 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCD2Q8WV60 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.38■■□□□ 1.33
PTCD2Q8WV60 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PTCD2Q8WV60 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.37■■□□□ 1.33
PTCD2Q8WV60 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms