Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
U2AF1L4Q8WU68 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
U2AF1L4Q8WU68 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
U2AF1L4Q8WU68 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.64■■□□□ 1.86
U2AF1L4Q8WU68 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
U2AF1L4Q8WU68 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.64■■□□□ 1.85
U2AF1L4Q8WU68 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 SRD5A1P1-201ENST00000442297 786 ntBASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 AC087623.3-201ENST00000607047 1098 ntBASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
U2AF1L4Q8WU68 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
U2AF1L4Q8WU68 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
U2AF1L4Q8WU68 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
U2AF1L4Q8WU68 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
U2AF1L4Q8WU68 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
U2AF1L4Q8WU68 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
U2AF1L4Q8WU68 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.61■■□□□ 1.85
U2AF1L4Q8WU68 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.61■■□□□ 1.85
U2AF1L4Q8WU68 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
U2AF1L4Q8WU68 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
U2AF1L4Q8WU68 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.6■■□□□ 1.85
U2AF1L4Q8WU68 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
U2AF1L4Q8WU68 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
U2AF1L4Q8WU68 MIR939-201ENST00000401314 82 ntBASIC26.6■■□□□ 1.85
U2AF1L4Q8WU68 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.6■■□□□ 1.85
U2AF1L4Q8WU68 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.59■■□□□ 1.85
U2AF1L4Q8WU68 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.59■■□□□ 1.85
U2AF1L4Q8WU68 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.59■■□□□ 1.85
U2AF1L4Q8WU68 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.59■■□□□ 1.85
U2AF1L4Q8WU68 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.59■■□□□ 1.85
U2AF1L4Q8WU68 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
U2AF1L4Q8WU68 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
U2AF1L4Q8WU68 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
U2AF1L4Q8WU68 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
U2AF1L4Q8WU68 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
U2AF1L4Q8WU68 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
U2AF1L4Q8WU68 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 MIR6722-201ENST00000617286 78 ntBASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
U2AF1L4Q8WU68 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
U2AF1L4Q8WU68 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.56■■□□□ 1.84
U2AF1L4Q8WU68 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 AP001330.3-201ENST00000520123 633 ntBASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.55■■□□□ 1.84
U2AF1L4Q8WU68 SNX5-217ENST00000606557 1087 ntBASIC26.54■■□□□ 1.84
U2AF1L4Q8WU68 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
U2AF1L4Q8WU68 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 AC091060.1-201ENST00000623524 1766 ntBASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
U2AF1L4Q8WU68 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
U2AF1L4Q8WU68 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
U2AF1L4Q8WU68 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
U2AF1L4Q8WU68 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
U2AF1L4Q8WU68 AC091305.1-201ENST00000479476 895 ntBASIC26.52■■□□□ 1.84
U2AF1L4Q8WU68 AP004609.3-201ENST00000610705 1884 ntBASIC26.51■■□□□ 1.83
U2AF1L4Q8WU68 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
U2AF1L4Q8WU68 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
U2AF1L4Q8WU68 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
U2AF1L4Q8WU68 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
U2AF1L4Q8WU68 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
U2AF1L4Q8WU68 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
U2AF1L4Q8WU68 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.49■■□□□ 1.83
U2AF1L4Q8WU68 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
U2AF1L4Q8WU68 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
U2AF1L4Q8WU68 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
U2AF1L4Q8WU68 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
U2AF1L4Q8WU68 AC090192.1-201ENST00000517740 490 ntBASIC26.47■■□□□ 1.83
U2AF1L4Q8WU68 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms