Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.2■■□□□ 1.46
SH3RF2Q8TEC5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.2■■□□□ 1.46
SH3RF2Q8TEC5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SH3RF2Q8TEC5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.2■■□□□ 1.46
SH3RF2Q8TEC5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 SNX5-217ENST00000606557 1087 ntBASIC24.19■■□□□ 1.46
SH3RF2Q8TEC5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
SH3RF2Q8TEC5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.18■■□□□ 1.46
SH3RF2Q8TEC5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SH3RF2Q8TEC5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SH3RF2Q8TEC5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.18■■□□□ 1.46
SH3RF2Q8TEC5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 AL136116.3-201ENST00000402907 1138 ntBASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3RF2Q8TEC5 DUSP8P4-201ENST00000399538 1761 ntBASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.16■■□□□ 1.46
SH3RF2Q8TEC5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SH3RF2Q8TEC5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
SH3RF2Q8TEC5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
SH3RF2Q8TEC5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.14■■□□□ 1.45
SH3RF2Q8TEC5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SH3RF2Q8TEC5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SH3RF2Q8TEC5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3RF2Q8TEC5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 MIR4466-201ENST00000606121 54 ntBASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 MIR6722-201ENST00000617286 78 ntBASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SH3RF2Q8TEC5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.11■■□□□ 1.45
SH3RF2Q8TEC5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SH3RF2Q8TEC5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.11■■□□□ 1.45
SH3RF2Q8TEC5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SH3RF2Q8TEC5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SH3RF2Q8TEC5 SLC6A10P-202ENST00000431994 2058 ntBASIC24.09■■□□□ 1.45
SH3RF2Q8TEC5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.09■■□□□ 1.45
SH3RF2Q8TEC5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.09■■□□□ 1.45
SH3RF2Q8TEC5 AL512631.2-201ENST00000604634 923 ntBASIC24.09■■□□□ 1.45
SH3RF2Q8TEC5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.09■■□□□ 1.45
SH3RF2Q8TEC5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms