Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CCER1Q8TC90 KRT18P10-201ENST00000388836 1287 ntBASIC34.59■■■■□ 3.13
CCER1Q8TC90 AC133552.2-201ENST00000619106 1032 ntBASIC34.59■■■■□ 3.13
CCER1Q8TC90 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
CCER1Q8TC90 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CCER1Q8TC90 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
CCER1Q8TC90 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CCER1Q8TC90 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC34.58■■■■□ 3.13
CCER1Q8TC90 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CCER1Q8TC90 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC34.58■■■■□ 3.13
CCER1Q8TC90 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC34.58■■■■□ 3.13
CCER1Q8TC90 HES4-204ENST00000484667 667 ntTSL 3 BASIC34.58■■■■□ 3.13
CCER1Q8TC90 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
CCER1Q8TC90 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC34.57■■■■□ 3.13
CCER1Q8TC90 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
CCER1Q8TC90 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CCER1Q8TC90 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.57■■■■□ 3.12
CCER1Q8TC90 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC34.57■■■■□ 3.12
CCER1Q8TC90 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC34.57■■■■□ 3.12
CCER1Q8TC90 AC068473.5-201ENST00000616428 2072 ntBASIC34.56■■■■□ 3.12
CCER1Q8TC90 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CCER1Q8TC90 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CCER1Q8TC90 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC34.56■■■■□ 3.12
CCER1Q8TC90 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CCER1Q8TC90 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC34.55■■■■□ 3.12
CCER1Q8TC90 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CCER1Q8TC90 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CCER1Q8TC90 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CCER1Q8TC90 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
CCER1Q8TC90 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CCER1Q8TC90 DUSP8P5-201ENST00000422884 1815 ntBASIC34.54■■■■□ 3.12
CCER1Q8TC90 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC34.53■■■■□ 3.12
CCER1Q8TC90 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CCER1Q8TC90 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CCER1Q8TC90 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CCER1Q8TC90 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CCER1Q8TC90 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CCER1Q8TC90 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CCER1Q8TC90 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC34.52■■■■□ 3.12
CCER1Q8TC90 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC34.52■■■■□ 3.12
CCER1Q8TC90 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC34.52■■■■□ 3.12
CCER1Q8TC90 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CCER1Q8TC90 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CCER1Q8TC90 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC34.51■■■■□ 3.12
CCER1Q8TC90 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
CCER1Q8TC90 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CCER1Q8TC90 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CCER1Q8TC90 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CCER1Q8TC90 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CCER1Q8TC90 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC34.49■■■■□ 3.11
CCER1Q8TC90 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CCER1Q8TC90 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CCER1Q8TC90 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CCER1Q8TC90 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC34.48■■■■□ 3.11
CCER1Q8TC90 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC34.48■■■■□ 3.11
CCER1Q8TC90 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC34.48■■■■□ 3.11
CCER1Q8TC90 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
CCER1Q8TC90 ME2-208ENST00000638937 2471 ntTSL 5 BASIC34.48■■■■□ 3.11
CCER1Q8TC90 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC34.48■■■■□ 3.11
CCER1Q8TC90 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CCER1Q8TC90 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
CCER1Q8TC90 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CCER1Q8TC90 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
CCER1Q8TC90 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CCER1Q8TC90 C9orf163-202ENST00000624034 2573 ntBASIC34.46■■■■□ 3.11
CCER1Q8TC90 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC34.46■■■■□ 3.11
CCER1Q8TC90 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CCER1Q8TC90 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC34.45■■■■□ 3.11
CCER1Q8TC90 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CCER1Q8TC90 ABHD17AP3-201ENST00000503096 1137 ntBASIC34.45■■■■□ 3.11
CCER1Q8TC90 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CCER1Q8TC90 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CCER1Q8TC90 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC34.45■■■■□ 3.1
CCER1Q8TC90 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CCER1Q8TC90 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC34.44■■■■□ 3.1
CCER1Q8TC90 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CCER1Q8TC90 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
CCER1Q8TC90 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
CCER1Q8TC90 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC34.44■■■■□ 3.1
CCER1Q8TC90 AC012676.1-201ENST00000574705 1949 ntBASIC34.43■■■■□ 3.1
CCER1Q8TC90 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CCER1Q8TC90 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CCER1Q8TC90 RNF126P1-201ENST00000567452 1320 ntBASIC34.43■■■■□ 3.1
CCER1Q8TC90 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CCER1Q8TC90 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CCER1Q8TC90 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CCER1Q8TC90 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CCER1Q8TC90 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
CCER1Q8TC90 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
CCER1Q8TC90 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC34.42■■■■□ 3.1
CCER1Q8TC90 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CCER1Q8TC90 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CCER1Q8TC90 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
CCER1Q8TC90 SPCS2P3-201ENST00000500401 656 ntBASIC34.42■■■■□ 3.1
CCER1Q8TC90 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CCER1Q8TC90 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
CCER1Q8TC90 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC34.42■■■■□ 3.1
CCER1Q8TC90 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CCER1Q8TC90 RPS2P7-201ENST00000447334 885 ntBASIC34.41■■■■□ 3.1
CCER1Q8TC90 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms