Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 MIR4466-201ENST00000606121 54 ntBASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 AC010501.1-201ENST00000606270 1962 ntBASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 AL139246.5-201ENST00000606645 996 ntBASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SHKBP1Q8TBC3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SHKBP1Q8TBC3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SHKBP1Q8TBC3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SHKBP1Q8TBC3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SHKBP1Q8TBC3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.45■■□□□ 1.5
SHKBP1Q8TBC3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
SHKBP1Q8TBC3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SHKBP1Q8TBC3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 SNX5-217ENST00000606557 1087 ntBASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.44■■□□□ 1.5
SHKBP1Q8TBC3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 AL512631.2-201ENST00000604634 923 ntBASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 AC091060.1-201ENST00000623524 1766 ntBASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHKBP1Q8TBC3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.42■■□□□ 1.5
SHKBP1Q8TBC3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHKBP1Q8TBC3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHKBP1Q8TBC3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHKBP1Q8TBC3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 AC110285.6-201ENST00000617652 491 ntBASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHKBP1Q8TBC3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.39■■□□□ 1.5
SHKBP1Q8TBC3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.39■■□□□ 1.5
SHKBP1Q8TBC3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHKBP1Q8TBC3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.39■■□□□ 1.49
SHKBP1Q8TBC3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHKBP1Q8TBC3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHKBP1Q8TBC3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHKBP1Q8TBC3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.38■■□□□ 1.49
SHKBP1Q8TBC3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SHKBP1Q8TBC3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SHKBP1Q8TBC3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 MIR935-201ENST00000401179 91 ntBASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 MIR6722-201ENST00000617286 78 ntBASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SHKBP1Q8TBC3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.36■■□□□ 1.49
SHKBP1Q8TBC3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHKBP1Q8TBC3 AC020928.2-201ENST00000588717 2197 ntBASIC24.36■■□□□ 1.49
SHKBP1Q8TBC3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHKBP1Q8TBC3 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.36■■□□□ 1.49
SHKBP1Q8TBC3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.36■■□□□ 1.49
SHKBP1Q8TBC3 AC092803.2-201ENST00000564287 1899 ntBASIC24.36■■□□□ 1.49
SHKBP1Q8TBC3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms