Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
SMARCC2Q8TAQ2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC2Q8TAQ2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC2Q8TAQ2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC2Q8TAQ2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC2Q8TAQ2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC2Q8TAQ2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCC2Q8TAQ2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCC2Q8TAQ2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.26■■□□□ 1.95
SMARCC2Q8TAQ2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SMARCC2Q8TAQ2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
SMARCC2Q8TAQ2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCC2Q8TAQ2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC2Q8TAQ2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.25■■□□□ 1.95
SMARCC2Q8TAQ2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.25■■□□□ 1.95
SMARCC2Q8TAQ2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.25■■□□□ 1.95
SMARCC2Q8TAQ2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC2Q8TAQ2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC2Q8TAQ2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC2Q8TAQ2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.24■■□□□ 1.95
SMARCC2Q8TAQ2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC2Q8TAQ2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.24■■□□□ 1.95
SMARCC2Q8TAQ2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC2Q8TAQ2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC2Q8TAQ2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC2Q8TAQ2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 AC103724.3-201ENST00000564481 992 ntBASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 AL451085.2-201ENST00000605085 799 ntBASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC2Q8TAQ2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMARCC2Q8TAQ2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 AC022616.5-201ENST00000518796 181 ntBASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC2Q8TAQ2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.2■■□□□ 1.95
SMARCC2Q8TAQ2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SMARCC2Q8TAQ2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 AC004812.2-201ENST00000611079 2094 ntBASIC27.2■■□□□ 1.94
SMARCC2Q8TAQ2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 AL031848.2-201ENST00000607670 837 ntBASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC2Q8TAQ2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC2Q8TAQ2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC2Q8TAQ2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.18■■□□□ 1.94
SMARCC2Q8TAQ2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC2Q8TAQ2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.18■■□□□ 1.94
SMARCC2Q8TAQ2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC2Q8TAQ2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMARCC2Q8TAQ2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.17■■□□□ 1.94
SMARCC2Q8TAQ2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SMARCC2Q8TAQ2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 AL592295.1-201ENST00000400984 884 ntBASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SMARCC2Q8TAQ2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC2Q8TAQ2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC2Q8TAQ2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC2Q8TAQ2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC2Q8TAQ2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMARCC2Q8TAQ2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMARCC2Q8TAQ2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMARCC2Q8TAQ2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMARCC2Q8TAQ2 AL035685.1-201ENST00000636663 812 ntBASIC27.14■■□□□ 1.94
SMARCC2Q8TAQ2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SMARCC2Q8TAQ2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMARCC2Q8TAQ2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMARCC2Q8TAQ2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms