Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 MIR6089-201ENST00000616698 64 ntBASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
PCDH20Q8N6Y1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 AF131216.4-201ENST00000638924 1588 ntBASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH20Q8N6Y1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH20Q8N6Y1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDH20Q8N6Y1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH20Q8N6Y1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH20Q8N6Y1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PCDH20Q8N6Y1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH20Q8N6Y1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH20Q8N6Y1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH20Q8N6Y1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH20Q8N6Y1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH20Q8N6Y1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH20Q8N6Y1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH20Q8N6Y1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH20Q8N6Y1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH20Q8N6Y1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
PCDH20Q8N6Y1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 AC092028.1-203ENST00000608262 953 ntBASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH20Q8N6Y1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH20Q8N6Y1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH20Q8N6Y1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH20Q8N6Y1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDH20Q8N6Y1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH20Q8N6Y1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PCDH20Q8N6Y1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 AL356441.2-201ENST00000443009 864 ntBASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH20Q8N6Y1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH20Q8N6Y1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH20Q8N6Y1 UNC93B8-201ENST00000511903 705 ntBASIC23.58■■□□□ 1.37
PCDH20Q8N6Y1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PCDH20Q8N6Y1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH20Q8N6Y1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH20Q8N6Y1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.58■■□□□ 1.36
PCDH20Q8N6Y1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PCDH20Q8N6Y1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH20Q8N6Y1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH20Q8N6Y1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDH20Q8N6Y1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH20Q8N6Y1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH20Q8N6Y1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH20Q8N6Y1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms