Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RAB42Q8N4Z0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RAB42Q8N4Z0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RAB42Q8N4Z0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RAB42Q8N4Z0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.57■■□□□ 1.2
RAB42Q8N4Z0 BX664725.1-201ENST00000438252 379 ntBASIC22.57■■□□□ 1.2
RAB42Q8N4Z0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.57■■□□□ 1.2
RAB42Q8N4Z0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RAB42Q8N4Z0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
RAB42Q8N4Z0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAB42Q8N4Z0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RAB42Q8N4Z0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAB42Q8N4Z0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.55■■□□□ 1.2
RAB42Q8N4Z0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAB42Q8N4Z0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.55■■□□□ 1.2
RAB42Q8N4Z0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAB42Q8N4Z0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RAB42Q8N4Z0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 AL451085.2-201ENST00000605085 799 ntBASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 AC137630.3-201ENST00000607245 391 ntBASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB42Q8N4Z0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 KRT125P-201ENST00000546827 989 ntBASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 Z92544.1-202ENST00000571933 1220 ntBASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB42Q8N4Z0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
RAB42Q8N4Z0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 AC009299.2-201ENST00000482477 511 ntBASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.51■■□□□ 1.19
RAB42Q8N4Z0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAB42Q8N4Z0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.49■■□□□ 1.19
RAB42Q8N4Z0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.49■■□□□ 1.19
RAB42Q8N4Z0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.49■■□□□ 1.19
RAB42Q8N4Z0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.49■■□□□ 1.19
RAB42Q8N4Z0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.49■■□□□ 1.19
RAB42Q8N4Z0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAB42Q8N4Z0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 HLA-L-211ENST00000482052 1765 ntBASIC22.48■■□□□ 1.19
RAB42Q8N4Z0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAB42Q8N4Z0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms