Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.93■■□□□ 1.26
CPNE9Q8IYJ1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CPNE9Q8IYJ1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPNE9Q8IYJ1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.93■■□□□ 1.26
CPNE9Q8IYJ1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPNE9Q8IYJ1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CPNE9Q8IYJ1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPNE9Q8IYJ1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.92■■□□□ 1.26
CPNE9Q8IYJ1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 AL033527.3-201ENST00000566366 1196 ntBASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 AC141586.4-201ENST00000624558 1573 ntBASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE9Q8IYJ1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 AC019171.1-201ENST00000601251 1056 ntBASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE9Q8IYJ1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CPNE9Q8IYJ1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CPNE9Q8IYJ1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
CPNE9Q8IYJ1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.89■■□□□ 1.25
CPNE9Q8IYJ1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CPNE9Q8IYJ1 AC010980.1-201ENST00000587192 1142 ntBASIC22.89■■□□□ 1.25
CPNE9Q8IYJ1 PVT1_1.1-201ENST00000615125 194 ntBASIC22.89■■□□□ 1.25
CPNE9Q8IYJ1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CPNE9Q8IYJ1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CPNE9Q8IYJ1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
CPNE9Q8IYJ1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CPNE9Q8IYJ1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 AC004812.2-201ENST00000611079 2094 ntBASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPNE9Q8IYJ1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 AC074183.2-201ENST00000623112 922 ntBASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPNE9Q8IYJ1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms