Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC71Q8IV32 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC71Q8IV32 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC71Q8IV32 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC71Q8IV32 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC71Q8IV32 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC71Q8IV32 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC71Q8IV32 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC71Q8IV32 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC71Q8IV32 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC71Q8IV32 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC71Q8IV32 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC71Q8IV32 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC71Q8IV32 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC71Q8IV32 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC71Q8IV32 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC71Q8IV32 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC71Q8IV32 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC71Q8IV32 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC71Q8IV32 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC71Q8IV32 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC71Q8IV32 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC71Q8IV32 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC71Q8IV32 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC71Q8IV32 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC71Q8IV32 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC71Q8IV32 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC71Q8IV32 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC71Q8IV32 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC71Q8IV32 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC71Q8IV32 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC71Q8IV32 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC71Q8IV32 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC71Q8IV32 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC71Q8IV32 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC71Q8IV32 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
CCDC71Q8IV32 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC71Q8IV32 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC71Q8IV32 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC71Q8IV32 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC71Q8IV32 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC71Q8IV32 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC71Q8IV32 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
CCDC71Q8IV32 MIR4508-201ENST00000584178 70 ntBASIC21.65■■□□□ 1.06
CCDC71Q8IV32 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC71Q8IV32 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CCDC71Q8IV32 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC71Q8IV32 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CCDC71Q8IV32 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC71Q8IV32 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC71Q8IV32 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC71Q8IV32 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC71Q8IV32 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC71Q8IV32 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC71Q8IV32 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC71Q8IV32 AC004812.2-201ENST00000611079 2094 ntBASIC21.63■■□□□ 1.05
CCDC71Q8IV32 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC71Q8IV32 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC71Q8IV32 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC71Q8IV32 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC71Q8IV32 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC71Q8IV32 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC71Q8IV32 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC71Q8IV32 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 AC103724.3-201ENST00000564481 992 ntBASIC21.61■■□□□ 1.05
CCDC71Q8IV32 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 DUSP8P5-201ENST00000422884 1815 ntBASIC21.61■■□□□ 1.05
CCDC71Q8IV32 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC71Q8IV32 AC141586.4-201ENST00000624558 1573 ntBASIC21.61■■□□□ 1.05
CCDC71Q8IV32 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms