Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB43Q86YS6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.03■■□□□ 1.12
RAB43Q86YS6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAB43Q86YS6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RAB43Q86YS6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.03■■□□□ 1.12
RAB43Q86YS6 AC145676.1-201ENST00000514988 2004 ntBASIC22.03■■□□□ 1.12
RAB43Q86YS6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAB43Q86YS6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.03■■□□□ 1.12
RAB43Q86YS6 AC010997.5-201ENST00000609182 354 ntBASIC22.03■■□□□ 1.12
RAB43Q86YS6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.03■■□□□ 1.12
RAB43Q86YS6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAB43Q86YS6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RAB43Q86YS6 FOXO3B-201ENST00000395675 1928 ntBASIC22.02■■□□□ 1.12
RAB43Q86YS6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAB43Q86YS6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.02■■□□□ 1.12
RAB43Q86YS6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAB43Q86YS6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB43Q86YS6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RAB43Q86YS6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RAB43Q86YS6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAB43Q86YS6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RAB43Q86YS6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22■■□□□ 1.11
RAB43Q86YS6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22■■□□□ 1.11
RAB43Q86YS6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22■■□□□ 1.11
RAB43Q86YS6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RAB43Q86YS6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22■■□□□ 1.11
RAB43Q86YS6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.99■■□□□ 1.11
RAB43Q86YS6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RAB43Q86YS6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.99■■□□□ 1.11
RAB43Q86YS6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.99■■□□□ 1.11
RAB43Q86YS6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAB43Q86YS6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.99■■□□□ 1.11
RAB43Q86YS6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB43Q86YS6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB43Q86YS6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB43Q86YS6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB43Q86YS6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RAB43Q86YS6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB43Q86YS6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.98■■□□□ 1.11
RAB43Q86YS6 MIR6724-1-201ENST00000616420 92 ntBASIC21.98■■□□□ 1.11
RAB43Q86YS6 MIR6724-2-201ENST00000616483 92 ntBASIC21.98■■□□□ 1.11
RAB43Q86YS6 MIR6724-4-201ENST00000617390 92 ntBASIC21.98■■□□□ 1.11
RAB43Q86YS6 MIR6724-3-201ENST00000622482 92 ntBASIC21.98■■□□□ 1.11
RAB43Q86YS6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB43Q86YS6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB43Q86YS6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.97■■□□□ 1.11
RAB43Q86YS6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB43Q86YS6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
RAB43Q86YS6 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.97■■□□□ 1.11
RAB43Q86YS6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RAB43Q86YS6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RAB43Q86YS6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB43Q86YS6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RAB43Q86YS6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB43Q86YS6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.96■■□□□ 1.11
RAB43Q86YS6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.96■■□□□ 1.11
RAB43Q86YS6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.96■■□□□ 1.11
RAB43Q86YS6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.96■■□□□ 1.11
RAB43Q86YS6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.96■■□□□ 1.11
RAB43Q86YS6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.96■■□□□ 1.11
RAB43Q86YS6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RAB43Q86YS6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.95■■□□□ 1.1
RAB43Q86YS6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAB43Q86YS6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.95■■□□□ 1.1
RAB43Q86YS6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RAB43Q86YS6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RAB43Q86YS6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RAB43Q86YS6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RAB43Q86YS6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB43Q86YS6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB43Q86YS6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.94■■□□□ 1.1
RAB43Q86YS6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.94■■□□□ 1.1
RAB43Q86YS6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.94■■□□□ 1.1
RAB43Q86YS6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.94■■□□□ 1.1
RAB43Q86YS6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.94■■□□□ 1.1
RAB43Q86YS6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB43Q86YS6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RAB43Q86YS6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.94■■□□□ 1.1
RAB43Q86YS6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB43Q86YS6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB43Q86YS6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RAB43Q86YS6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RAB43Q86YS6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB43Q86YS6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.93■■□□□ 1.1
RAB43Q86YS6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RAB43Q86YS6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.93■■□□□ 1.1
RAB43Q86YS6 AL356740.2-201ENST00000601559 647 ntBASIC21.93■■□□□ 1.1
RAB43Q86YS6 AL117332.1-201ENST00000622628 974 ntBASIC21.93■■□□□ 1.1
RAB43Q86YS6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
RAB43Q86YS6 AC097639.1-201ENST00000565519 1891 ntBASIC21.92■■□□□ 1.1
RAB43Q86YS6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB43Q86YS6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB43Q86YS6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms