Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.69■□□□□ 0.74
LDLRAD3Q86YD5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LDLRAD3Q86YD5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 AC018755.3-202ENST00000596210 929 ntBASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 AC074183.2-201ENST00000623112 922 ntBASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDLRAD3Q86YD5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 RARRES2P1-201ENST00000474487 481 ntBASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDLRAD3Q86YD5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAD3Q86YD5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
LDLRAD3Q86YD5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAD3Q86YD5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAD3Q86YD5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
LDLRAD3Q86YD5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAD3Q86YD5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LDLRAD3Q86YD5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LDLRAD3Q86YD5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
LDLRAD3Q86YD5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAD3Q86YD5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAD3Q86YD5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LDLRAD3Q86YD5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.62■□□□□ 0.73
LDLRAD3Q86YD5 AC139795.1-202ENST00000500444 432 ntBASIC19.62■□□□□ 0.73
LDLRAD3Q86YD5 BHLHE23-202ENST00000612929 1109 ntBASIC19.62■□□□□ 0.73
LDLRAD3Q86YD5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAD3Q86YD5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAD3Q86YD5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAD3Q86YD5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAD3Q86YD5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.6■□□□□ 0.73
LDLRAD3Q86YD5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.6■□□□□ 0.73
LDLRAD3Q86YD5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.6■□□□□ 0.73
LDLRAD3Q86YD5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAD3Q86YD5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAD3Q86YD5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LDLRAD3Q86YD5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDLRAD3Q86YD5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDLRAD3Q86YD5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.58■□□□□ 0.73
LDLRAD3Q86YD5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAD3Q86YD5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.58■□□□□ 0.72
LDLRAD3Q86YD5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAD3Q86YD5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAD3Q86YD5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAD3Q86YD5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms