Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.09■□□□□ 0.81
COLCA1Q6ZS62 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COLCA1Q6ZS62 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COLCA1Q6ZS62 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.08■□□□□ 0.81
COLCA1Q6ZS62 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COLCA1Q6ZS62 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
COLCA1Q6ZS62 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.08■□□□□ 0.81
COLCA1Q6ZS62 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COLCA1Q6ZS62 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.07■□□□□ 0.8
COLCA1Q6ZS62 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 AC103834.1-201ENST00000520383 144 ntBASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 AC120024.1-201ENST00000562672 995 ntBASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COLCA1Q6ZS62 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COLCA1Q6ZS62 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COLCA1Q6ZS62 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COLCA1Q6ZS62 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.05■□□□□ 0.8
COLCA1Q6ZS62 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.05■□□□□ 0.8
COLCA1Q6ZS62 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COLCA1Q6ZS62 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COLCA1Q6ZS62 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.04■□□□□ 0.8
COLCA1Q6ZS62 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COLCA1Q6ZS62 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COLCA1Q6ZS62 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COLCA1Q6ZS62 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COLCA1Q6ZS62 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COLCA1Q6ZS62 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COLCA1Q6ZS62 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COLCA1Q6ZS62 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.03■□□□□ 0.8
COLCA1Q6ZS62 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.03■□□□□ 0.8
COLCA1Q6ZS62 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COLCA1Q6ZS62 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COLCA1Q6ZS62 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.02■□□□□ 0.79
COLCA1Q6ZS62 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COLCA1Q6ZS62 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
COLCA1Q6ZS62 AL161729.1-201ENST00000604104 1402 ntBASIC20.02■□□□□ 0.79
COLCA1Q6ZS62 AC004812.2-201ENST00000611079 2094 ntBASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 THA1P-201ENST00000590384 1145 ntBASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COLCA1Q6ZS62 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COLCA1Q6ZS62 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
COLCA1Q6ZS62 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COLCA1Q6ZS62 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20■□□□□ 0.79
COLCA1Q6ZS62 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20■□□□□ 0.79
COLCA1Q6ZS62 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 MIR4281-201ENST00000580852 62 ntBASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.99■□□□□ 0.79
COLCA1Q6ZS62 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 YBX1P4-201ENST00000392794 808 ntBASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms