Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTL6Q6ICC9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL6Q6ICC9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL6Q6ICC9 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.93■□□□□ 0.94
RTL6Q6ICC9 MIR6724-1-201ENST00000616420 92 ntBASIC20.93■□□□□ 0.94
RTL6Q6ICC9 MIR6724-2-201ENST00000616483 92 ntBASIC20.93■□□□□ 0.94
RTL6Q6ICC9 MIR6724-4-201ENST00000617390 92 ntBASIC20.93■□□□□ 0.94
RTL6Q6ICC9 MIR6724-3-201ENST00000622482 92 ntBASIC20.93■□□□□ 0.94
RTL6Q6ICC9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL6Q6ICC9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL6Q6ICC9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 AC090877.2-201ENST00000558441 1738 ntBASIC20.92■□□□□ 0.94
RTL6Q6ICC9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL6Q6ICC9 AC010501.1-201ENST00000606270 1962 ntBASIC20.92■□□□□ 0.94
RTL6Q6ICC9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL6Q6ICC9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RTL6Q6ICC9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RTL6Q6ICC9 MIR3621-201ENST00000580529 85 ntBASIC20.91■□□□□ 0.94
RTL6Q6ICC9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL6Q6ICC9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.89■□□□□ 0.94
RTL6Q6ICC9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTL6Q6ICC9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTL6Q6ICC9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.89■□□□□ 0.93
RTL6Q6ICC9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.89■□□□□ 0.93
RTL6Q6ICC9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.89■□□□□ 0.93
RTL6Q6ICC9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL6Q6ICC9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL6Q6ICC9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.89■□□□□ 0.93
RTL6Q6ICC9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL6Q6ICC9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTL6Q6ICC9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL6Q6ICC9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL6Q6ICC9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL6Q6ICC9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL6Q6ICC9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL6Q6ICC9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL6Q6ICC9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL6Q6ICC9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL6Q6ICC9 AL356740.2-201ENST00000601559 647 ntBASIC20.85■□□□□ 0.93
RTL6Q6ICC9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL6Q6ICC9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTL6Q6ICC9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL6Q6ICC9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 AL136116.3-201ENST00000402907 1138 ntBASIC20.84■□□□□ 0.93
RTL6Q6ICC9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms