Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 MIR638-201ENST00000385237 100 ntBASIC24.56■■□□□ 1.52
TPGS2Q68CL5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TPGS2Q68CL5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.55■■□□□ 1.52
TPGS2Q68CL5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
TPGS2Q68CL5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TPGS2Q68CL5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TPGS2Q68CL5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TPGS2Q68CL5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.55■■□□□ 1.52
TPGS2Q68CL5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TPGS2Q68CL5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.54■■□□□ 1.52
TPGS2Q68CL5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TPGS2Q68CL5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.54■■□□□ 1.52
TPGS2Q68CL5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.54■■□□□ 1.52
TPGS2Q68CL5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
TPGS2Q68CL5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TPGS2Q68CL5 SLC6A10P-202ENST00000431994 2058 ntBASIC24.54■■□□□ 1.52
TPGS2Q68CL5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TPGS2Q68CL5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TPGS2Q68CL5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TPGS2Q68CL5 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.53■■□□□ 1.52
TPGS2Q68CL5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TPGS2Q68CL5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TPGS2Q68CL5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPGS2Q68CL5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.52■■□□□ 1.52
TPGS2Q68CL5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPGS2Q68CL5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TPGS2Q68CL5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPGS2Q68CL5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TPGS2Q68CL5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPGS2Q68CL5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TPGS2Q68CL5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TPGS2Q68CL5 MIR6089-201ENST00000616698 64 ntBASIC24.5■■□□□ 1.51
TPGS2Q68CL5 AC110285.6-201ENST00000617652 491 ntBASIC24.5■■□□□ 1.51
TPGS2Q68CL5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TPGS2Q68CL5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TPGS2Q68CL5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
TPGS2Q68CL5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TPGS2Q68CL5 AC145676.1-201ENST00000514988 2004 ntBASIC24.49■■□□□ 1.51
TPGS2Q68CL5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPGS2Q68CL5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TPGS2Q68CL5 AC091060.1-201ENST00000623524 1766 ntBASIC24.49■■□□□ 1.51
TPGS2Q68CL5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
TPGS2Q68CL5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPGS2Q68CL5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPGS2Q68CL5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TPGS2Q68CL5 AC096631.2-201ENST00000436136 790 ntBASIC24.48■■□□□ 1.51
TPGS2Q68CL5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.48■■□□□ 1.51
TPGS2Q68CL5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.48■■□□□ 1.51
TPGS2Q68CL5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TPGS2Q68CL5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TPGS2Q68CL5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPGS2Q68CL5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TPGS2Q68CL5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.47■■□□□ 1.51
TPGS2Q68CL5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.46■■□□□ 1.51
TPGS2Q68CL5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TPGS2Q68CL5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TPGS2Q68CL5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.46■■□□□ 1.51
TPGS2Q68CL5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.46■■□□□ 1.51
TPGS2Q68CL5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
TPGS2Q68CL5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
TPGS2Q68CL5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
TPGS2Q68CL5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TPGS2Q68CL5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TPGS2Q68CL5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TPGS2Q68CL5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.45■■□□□ 1.5
TPGS2Q68CL5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.45■■□□□ 1.5
TPGS2Q68CL5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.45■■□□□ 1.5
TPGS2Q68CL5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 AC005703.6-201ENST00000623265 1329 ntBASIC24.44■■□□□ 1.5
TPGS2Q68CL5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TPGS2Q68CL5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.43■■□□□ 1.5
TPGS2Q68CL5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TPGS2Q68CL5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.43■■□□□ 1.5
TPGS2Q68CL5 AC133561.4-201ENST00000566112 224 ntBASIC24.43■■□□□ 1.5
TPGS2Q68CL5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.43■■□□□ 1.5
TPGS2Q68CL5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TPGS2Q68CL5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TPGS2Q68CL5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms