Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
NCBP3Q53F19 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCBP3Q53F19 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCBP3Q53F19 AC137630.3-201ENST00000607245 391 ntBASIC30.46■■■□□ 2.47
NCBP3Q53F19 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCBP3Q53F19 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.45■■■□□ 2.47
NCBP3Q53F19 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NCBP3Q53F19 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
NCBP3Q53F19 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
NCBP3Q53F19 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NCBP3Q53F19 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCBP3Q53F19 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCBP3Q53F19 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NCBP3Q53F19 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NCBP3Q53F19 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NCBP3Q53F19 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.43■■■□□ 2.46
NCBP3Q53F19 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NCBP3Q53F19 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
NCBP3Q53F19 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NCBP3Q53F19 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
NCBP3Q53F19 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
NCBP3Q53F19 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
NCBP3Q53F19 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NCBP3Q53F19 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NCBP3Q53F19 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
NCBP3Q53F19 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NCBP3Q53F19 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NCBP3Q53F19 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
NCBP3Q53F19 AL031848.2-201ENST00000607670 837 ntBASIC30.41■■■□□ 2.46
NCBP3Q53F19 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NCBP3Q53F19 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.41■■■□□ 2.46
NCBP3Q53F19 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NCBP3Q53F19 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.4■■■□□ 2.46
NCBP3Q53F19 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NCBP3Q53F19 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NCBP3Q53F19 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.4■■■□□ 2.46
NCBP3Q53F19 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.4■■■□□ 2.46
NCBP3Q53F19 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
NCBP3Q53F19 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC30.4■■■□□ 2.46
NCBP3Q53F19 KRT8P33-201ENST00000508125 1423 ntBASIC30.39■■■□□ 2.46
NCBP3Q53F19 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.39■■■□□ 2.46
NCBP3Q53F19 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NCBP3Q53F19 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.39■■■□□ 2.45
NCBP3Q53F19 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NCBP3Q53F19 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
NCBP3Q53F19 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.38■■■□□ 2.45
NCBP3Q53F19 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.38■■■□□ 2.45
NCBP3Q53F19 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
NCBP3Q53F19 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NCBP3Q53F19 LINC01124-201ENST00000409786 2117 ntBASIC30.37■■■□□ 2.45
NCBP3Q53F19 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NCBP3Q53F19 RARRES2P1-201ENST00000474487 481 ntBASIC30.37■■■□□ 2.45
NCBP3Q53F19 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NCBP3Q53F19 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
NCBP3Q53F19 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.36■■■□□ 2.45
NCBP3Q53F19 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NCBP3Q53F19 AC131274.2-201ENST00000580697 1507 ntBASIC30.36■■■□□ 2.45
NCBP3Q53F19 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NCBP3Q53F19 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.35■■■□□ 2.45
NCBP3Q53F19 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.35■■■□□ 2.45
NCBP3Q53F19 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NCBP3Q53F19 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.35■■■□□ 2.45
NCBP3Q53F19 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
NCBP3Q53F19 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.34■■■□□ 2.45
NCBP3Q53F19 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
NCBP3Q53F19 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
NCBP3Q53F19 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
NCBP3Q53F19 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NCBP3Q53F19 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.33■■■□□ 2.45
NCBP3Q53F19 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
NCBP3Q53F19 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
NCBP3Q53F19 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NCBP3Q53F19 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.32■■■□□ 2.44
NCBP3Q53F19 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NCBP3Q53F19 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
NCBP3Q53F19 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.31■■■□□ 2.44
NCBP3Q53F19 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
NCBP3Q53F19 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC30.31■■■□□ 2.44
NCBP3Q53F19 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NCBP3Q53F19 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
NCBP3Q53F19 AC021242.3-201ENST00000607598 1377 ntBASIC30.3■■■□□ 2.44
NCBP3Q53F19 AL022069.1-201ENST00000568025 1636 ntBASIC30.3■■■□□ 2.44
NCBP3Q53F19 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NCBP3Q53F19 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.3■■■□□ 2.44
NCBP3Q53F19 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.3■■■□□ 2.44
NCBP3Q53F19 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.3■■■□□ 2.44
NCBP3Q53F19 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NCBP3Q53F19 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.3■■■□□ 2.44
NCBP3Q53F19 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
NCBP3Q53F19 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NCBP3Q53F19 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NCBP3Q53F19 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
NCBP3Q53F19 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
NCBP3Q53F19 Z92544.1-202ENST00000571933 1220 ntBASIC30.29■■■□□ 2.44
NCBP3Q53F19 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
NCBP3Q53F19 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
NCBP3Q53F19 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
NCBP3Q53F19 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NCBP3Q53F19 AC093323.1-202ENST00000635031 2045 ntBASIC30.29■■■□□ 2.44
NCBP3Q53F19 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms