Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.77■■□□□ 1.88
USH1GQ495M9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USH1GQ495M9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
USH1GQ495M9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USH1GQ495M9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
USH1GQ495M9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
USH1GQ495M9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
USH1GQ495M9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
USH1GQ495M9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
USH1GQ495M9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
USH1GQ495M9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
USH1GQ495M9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
USH1GQ495M9 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.76■■□□□ 1.87
USH1GQ495M9 SNX5-217ENST00000606557 1087 ntBASIC26.76■■□□□ 1.87
USH1GQ495M9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.76■■□□□ 1.87
USH1GQ495M9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.76■■□□□ 1.87
USH1GQ495M9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
USH1GQ495M9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
USH1GQ495M9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
USH1GQ495M9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.75■■□□□ 1.87
USH1GQ495M9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.75■■□□□ 1.87
USH1GQ495M9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.75■■□□□ 1.87
USH1GQ495M9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
USH1GQ495M9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
USH1GQ495M9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.74■■□□□ 1.87
USH1GQ495M9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
USH1GQ495M9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.74■■□□□ 1.87
USH1GQ495M9 MIR6724-1-201ENST00000616420 92 ntBASIC26.74■■□□□ 1.87
USH1GQ495M9 MIR6724-2-201ENST00000616483 92 ntBASIC26.74■■□□□ 1.87
USH1GQ495M9 MIR6089-201ENST00000616698 64 ntBASIC26.74■■□□□ 1.87
USH1GQ495M9 MIR6724-4-201ENST00000617390 92 ntBASIC26.74■■□□□ 1.87
USH1GQ495M9 MIR6724-3-201ENST00000622482 92 ntBASIC26.74■■□□□ 1.87
USH1GQ495M9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.74■■□□□ 1.87
USH1GQ495M9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
USH1GQ495M9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.74■■□□□ 1.87
USH1GQ495M9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
USH1GQ495M9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.73■■□□□ 1.87
USH1GQ495M9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
USH1GQ495M9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
USH1GQ495M9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
USH1GQ495M9 AC008406.3-201ENST00000620001 1374 ntBASIC26.72■■□□□ 1.87
USH1GQ495M9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
USH1GQ495M9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.72■■□□□ 1.87
USH1GQ495M9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
USH1GQ495M9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.72■■□□□ 1.87
USH1GQ495M9 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.72■■□□□ 1.87
USH1GQ495M9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.72■■□□□ 1.87
USH1GQ495M9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
USH1GQ495M9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
USH1GQ495M9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
USH1GQ495M9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
USH1GQ495M9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.71■■□□□ 1.87
USH1GQ495M9 AL117332.1-201ENST00000622628 974 ntBASIC26.71■■□□□ 1.87
USH1GQ495M9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.71■■□□□ 1.87
USH1GQ495M9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
USH1GQ495M9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
USH1GQ495M9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.7■■□□□ 1.86
USH1GQ495M9 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.7■■□□□ 1.86
USH1GQ495M9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
USH1GQ495M9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
USH1GQ495M9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
USH1GQ495M9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
USH1GQ495M9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
USH1GQ495M9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
USH1GQ495M9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
USH1GQ495M9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.69■■□□□ 1.86
USH1GQ495M9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.69■■□□□ 1.86
USH1GQ495M9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.69■■□□□ 1.86
USH1GQ495M9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
USH1GQ495M9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
USH1GQ495M9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
USH1GQ495M9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
USH1GQ495M9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
USH1GQ495M9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.68■■□□□ 1.86
USH1GQ495M9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
USH1GQ495M9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
USH1GQ495M9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
USH1GQ495M9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
USH1GQ495M9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
USH1GQ495M9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.67■■□□□ 1.86
USH1GQ495M9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.67■■□□□ 1.86
USH1GQ495M9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.67■■□□□ 1.86
USH1GQ495M9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.67■■□□□ 1.86
USH1GQ495M9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.67■■□□□ 1.86
USH1GQ495M9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
USH1GQ495M9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
USH1GQ495M9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
USH1GQ495M9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
USH1GQ495M9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
USH1GQ495M9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.66■■□□□ 1.86
USH1GQ495M9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.66■■□□□ 1.86
USH1GQ495M9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
USH1GQ495M9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
USH1GQ495M9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
USH1GQ495M9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
USH1GQ495M9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
USH1GQ495M9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.65■■□□□ 1.86
USH1GQ495M9 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.65■■□□□ 1.86
USH1GQ495M9 AC131281.2-201ENST00000520478 145 ntBASIC26.65■■□□□ 1.86
USH1GQ495M9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms