Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.34■■■□□ 2.13
RFX7Q2KHR2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
RFX7Q2KHR2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.33■■■□□ 2.13
RFX7Q2KHR2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.33■■■□□ 2.13
RFX7Q2KHR2 KRT16P3-201ENST00000439127 1283 ntBASIC28.33■■■□□ 2.13
RFX7Q2KHR2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
RFX7Q2KHR2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
RFX7Q2KHR2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RFX7Q2KHR2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
RFX7Q2KHR2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.32■■■□□ 2.12
RFX7Q2KHR2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RFX7Q2KHR2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RFX7Q2KHR2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC28.32■■■□□ 2.12
RFX7Q2KHR2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RFX7Q2KHR2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RFX7Q2KHR2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RFX7Q2KHR2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.31■■■□□ 2.12
RFX7Q2KHR2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RFX7Q2KHR2 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.31■■■□□ 2.12
RFX7Q2KHR2 AC090877.2-201ENST00000558441 1738 ntBASIC28.31■■■□□ 2.12
RFX7Q2KHR2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
RFX7Q2KHR2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RFX7Q2KHR2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RFX7Q2KHR2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RFX7Q2KHR2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RFX7Q2KHR2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.28■■■□□ 2.12
RFX7Q2KHR2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RFX7Q2KHR2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RFX7Q2KHR2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.27■■■□□ 2.12
RFX7Q2KHR2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.27■■■□□ 2.12
RFX7Q2KHR2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.27■■■□□ 2.12
RFX7Q2KHR2 AC092028.1-203ENST00000608262 953 ntBASIC28.27■■■□□ 2.12
RFX7Q2KHR2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RFX7Q2KHR2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RFX7Q2KHR2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
RFX7Q2KHR2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
RFX7Q2KHR2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.26■■■□□ 2.12
RFX7Q2KHR2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.26■■■□□ 2.12
RFX7Q2KHR2 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.26■■■□□ 2.12
RFX7Q2KHR2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
RFX7Q2KHR2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
RFX7Q2KHR2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RFX7Q2KHR2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RFX7Q2KHR2 TSPY9P-201ENST00000440215 945 ntBASIC28.25■■■□□ 2.11
RFX7Q2KHR2 TSPY11P-201ENST00000442607 1045 ntBASIC28.25■■■□□ 2.11
RFX7Q2KHR2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RFX7Q2KHR2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
RFX7Q2KHR2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RFX7Q2KHR2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
RFX7Q2KHR2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RFX7Q2KHR2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.23■■■□□ 2.11
RFX7Q2KHR2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RFX7Q2KHR2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RFX7Q2KHR2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RFX7Q2KHR2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.22■■■□□ 2.11
RFX7Q2KHR2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.22■■■□□ 2.11
RFX7Q2KHR2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RFX7Q2KHR2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.22■■■□□ 2.11
RFX7Q2KHR2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.22■■■□□ 2.11
RFX7Q2KHR2 AL139125.2-201ENST00000623134 1869 ntBASIC28.22■■■□□ 2.11
RFX7Q2KHR2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 AC019069.1-201ENST00000610008 1333 ntBASIC28.21■■■□□ 2.11
RFX7Q2KHR2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RFX7Q2KHR2 AF131216.4-201ENST00000638924 1588 ntBASIC28.2■■■□□ 2.11
RFX7Q2KHR2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.2■■■□□ 2.1
RFX7Q2KHR2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.19■■■□□ 2.1
RFX7Q2KHR2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
RFX7Q2KHR2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RFX7Q2KHR2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.18■■■□□ 2.1
RFX7Q2KHR2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms