Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
EPHA4P54764 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
EPHA4P54764 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
EPHA4P54764 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
EPHA4P54764 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
EPHA4P54764 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.46■■□□□ 1.19
EPHA4P54764 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.46■■□□□ 1.19
EPHA4P54764 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.46■■□□□ 1.19
EPHA4P54764 MIR6089-201ENST00000616698 64 ntBASIC22.46■■□□□ 1.19
EPHA4P54764 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
EPHA4P54764 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
EPHA4P54764 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.46■■□□□ 1.19
EPHA4P54764 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.46■■□□□ 1.19
EPHA4P54764 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
EPHA4P54764 SLC6A10P-202ENST00000431994 2058 ntBASIC22.45■■□□□ 1.18
EPHA4P54764 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EPHA4P54764 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.45■■□□□ 1.18
EPHA4P54764 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
EPHA4P54764 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.45■■□□□ 1.18
EPHA4P54764 AC131281.2-201ENST00000520478 145 ntBASIC22.45■■□□□ 1.18
EPHA4P54764 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EPHA4P54764 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
EPHA4P54764 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
EPHA4P54764 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.45■■□□□ 1.18
EPHA4P54764 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.44■■□□□ 1.18
EPHA4P54764 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
EPHA4P54764 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.44■■□□□ 1.18
EPHA4P54764 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
EPHA4P54764 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.43■■□□□ 1.18
EPHA4P54764 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.43■■□□□ 1.18
EPHA4P54764 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
EPHA4P54764 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
EPHA4P54764 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
EPHA4P54764 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
EPHA4P54764 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
EPHA4P54764 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.43■■□□□ 1.18
EPHA4P54764 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.43■■□□□ 1.18
EPHA4P54764 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.43■■□□□ 1.18
EPHA4P54764 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
EPHA4P54764 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
EPHA4P54764 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
EPHA4P54764 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.42■■□□□ 1.18
EPHA4P54764 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.42■■□□□ 1.18
EPHA4P54764 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EPHA4P54764 AC004448.1-201ENST00000458332 883 ntBASIC22.42■■□□□ 1.18
EPHA4P54764 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
EPHA4P54764 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EPHA4P54764 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.41■■□□□ 1.18
EPHA4P54764 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.41■■□□□ 1.18
EPHA4P54764 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
EPHA4P54764 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.41■■□□□ 1.18
EPHA4P54764 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.41■■□□□ 1.18
EPHA4P54764 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.41■■□□□ 1.18
EPHA4P54764 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.41■■□□□ 1.18
EPHA4P54764 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.4■■□□□ 1.18
EPHA4P54764 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.4■■□□□ 1.18
EPHA4P54764 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.4■■□□□ 1.18
EPHA4P54764 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
EPHA4P54764 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
EPHA4P54764 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
EPHA4P54764 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.39■■□□□ 1.18
EPHA4P54764 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EPHA4P54764 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.39■■□□□ 1.17
EPHA4P54764 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.39■■□□□ 1.17
EPHA4P54764 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
EPHA4P54764 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EPHA4P54764 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EPHA4P54764 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.38■■□□□ 1.17
EPHA4P54764 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
EPHA4P54764 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.38■■□□□ 1.17
EPHA4P54764 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.38■■□□□ 1.17
EPHA4P54764 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.38■■□□□ 1.17
EPHA4P54764 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.38■■□□□ 1.17
EPHA4P54764 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.38■■□□□ 1.17
EPHA4P54764 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.37■■□□□ 1.17
EPHA4P54764 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.37■■□□□ 1.17
EPHA4P54764 AL136116.3-201ENST00000402907 1138 ntBASIC22.37■■□□□ 1.17
EPHA4P54764 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EPHA4P54764 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.36■■□□□ 1.17
EPHA4P54764 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EPHA4P54764 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EPHA4P54764 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EPHA4P54764 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.36■■□□□ 1.17
EPHA4P54764 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.36■■□□□ 1.17
EPHA4P54764 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EPHA4P54764 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.36■■□□□ 1.17
EPHA4P54764 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
EPHA4P54764 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.36■■□□□ 1.17
EPHA4P54764 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.36■■□□□ 1.17
EPHA4P54764 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EPHA4P54764 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EPHA4P54764 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.35■■□□□ 1.17
EPHA4P54764 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
EPHA4P54764 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.35■■□□□ 1.17
EPHA4P54764 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EPHA4P54764 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EPHA4P54764 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
EPHA4P54764 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.35■■□□□ 1.17
EPHA4P54764 AL512631.2-201ENST00000604634 923 ntBASIC22.35■■□□□ 1.17
EPHA4P54764 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms