Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC25A1P53007 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC25A1P53007 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC25A1P53007 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC25A1P53007 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC25A1P53007 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC25A1P53007 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC25A1P53007 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC25A1P53007 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC25A1P53007 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC25A1P53007 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC25A1P53007 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC25A1P53007 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC25A1P53007 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC25A1P53007 AL592293.1-201ENST00000502889 1188 ntBASIC20.64■□□□□ 0.89
SLC25A1P53007 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC25A1P53007 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC25A1P53007 AC012676.1-201ENST00000574705 1949 ntBASIC20.64■□□□□ 0.89
SLC25A1P53007 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC25A1P53007 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC25A1P53007 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC25A1P53007 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC25A1P53007 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC25A1P53007 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC25A1P53007 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC25A1P53007 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SLC25A1P53007 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SLC25A1P53007 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC25A1P53007 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLC25A1P53007 AC087393.1-201ENST00000582896 145 ntBASIC20.63■□□□□ 0.89
SLC25A1P53007 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC25A1P53007 AC090877.2-201ENST00000558441 1738 ntBASIC20.63■□□□□ 0.89
SLC25A1P53007 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC25A1P53007 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC25A1P53007 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC25A1P53007 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC25A1P53007 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC25A1P53007 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC25A1P53007 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC25A1P53007 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC25A1P53007 SPCS2P3-201ENST00000500401 656 ntBASIC20.62■□□□□ 0.89
SLC25A1P53007 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC25A1P53007 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC25A1P53007 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC25A1P53007 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC25A1P53007 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC25A1P53007 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC25A1P53007 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC25A1P53007 AL592295.1-201ENST00000400984 884 ntBASIC20.61■□□□□ 0.89
SLC25A1P53007 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC25A1P53007 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.61■□□□□ 0.89
SLC25A1P53007 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC25A1P53007 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC25A1P53007 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC25A1P53007 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC25A1P53007 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC25A1P53007 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC25A1P53007 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC25A1P53007 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC25A1P53007 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC25A1P53007 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC25A1P53007 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC25A1P53007 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SLC25A1P53007 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC25A1P53007 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC25A1P53007 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC25A1P53007 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC25A1P53007 AC068473.5-201ENST00000616428 2072 ntBASIC20.58■□□□□ 0.89
SLC25A1P53007 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC25A1P53007 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC25A1P53007 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC25A1P53007 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC25A1P53007 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC25A1P53007 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC25A1P53007 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC25A1P53007 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC25A1P53007 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC25A1P53007 MIR6765-201ENST00000614092 87 ntBASIC20.58■□□□□ 0.89
SLC25A1P53007 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC25A1P53007 AL161729.1-201ENST00000604104 1402 ntBASIC20.58■□□□□ 0.88
SLC25A1P53007 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
SLC25A1P53007 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC25A1P53007 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC25A1P53007 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
SLC25A1P53007 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC25A1P53007 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC25A1P53007 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC25A1P53007 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC25A1P53007 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC25A1P53007 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC25A1P53007 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A1P53007 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A1P53007 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC25A1P53007 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC25A1P53007 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SLC25A1P53007 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A1P53007 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SLC25A1P53007 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A1P53007 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A1P53007 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms