Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDHAP31040 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHAP31040 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHAP31040 AL592295.1-201ENST00000400984 884 ntBASIC20.78■□□□□ 0.92
SDHAP31040 U85056.1-201ENST00000616429 682 ntBASIC20.78■□□□□ 0.92
SDHAP31040 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHAP31040 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SDHAP31040 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHAP31040 AC090877.2-201ENST00000558441 1738 ntBASIC20.78■□□□□ 0.92
SDHAP31040 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHAP31040 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHAP31040 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SDHAP31040 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.77■□□□□ 0.92
SDHAP31040 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SDHAP31040 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHAP31040 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SDHAP31040 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHAP31040 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SDHAP31040 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SDHAP31040 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.76■□□□□ 0.91
SDHAP31040 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.76■□□□□ 0.91
SDHAP31040 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SDHAP31040 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.76■□□□□ 0.91
SDHAP31040 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.76■□□□□ 0.91
SDHAP31040 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SDHAP31040 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.75■□□□□ 0.91
SDHAP31040 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAP31040 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SDHAP31040 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAP31040 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SDHAP31040 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAP31040 AC129492.7-201ENST00000622992 756 ntBASIC20.74■□□□□ 0.91
SDHAP31040 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.74■□□□□ 0.91
SDHAP31040 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAP31040 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAP31040 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAP31040 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SDHAP31040 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAP31040 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SDHAP31040 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.73■□□□□ 0.91
SDHAP31040 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAP31040 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAP31040 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAP31040 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SDHAP31040 LONRF2P2-201ENST00000439212 571 ntBASIC20.72■□□□□ 0.91
SDHAP31040 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAP31040 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.72■□□□□ 0.91
SDHAP31040 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAP31040 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAP31040 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
SDHAP31040 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.71■□□□□ 0.91
SDHAP31040 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SDHAP31040 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
SDHAP31040 KRT18P60-201ENST00000312876 1297 ntBASIC20.71■□□□□ 0.91
SDHAP31040 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.71■□□□□ 0.91
SDHAP31040 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAP31040 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAP31040 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.71■□□□□ 0.91
SDHAP31040 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.71■□□□□ 0.91
SDHAP31040 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
SDHAP31040 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAP31040 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAP31040 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAP31040 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SDHAP31040 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.7■□□□□ 0.9
SDHAP31040 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAP31040 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.7■□□□□ 0.9
SDHAP31040 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAP31040 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAP31040 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
SDHAP31040 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SDHAP31040 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAP31040 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SDHAP31040 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAP31040 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.68■□□□□ 0.9
SDHAP31040 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAP31040 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAP31040 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.68■□□□□ 0.9
SDHAP31040 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.68■□□□□ 0.9
SDHAP31040 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAP31040 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAP31040 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.67■□□□□ 0.9
SDHAP31040 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAP31040 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAP31040 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SDHAP31040 ABHD17AP5-201ENST00000580133 923 ntBASIC20.67■□□□□ 0.9
SDHAP31040 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.67■□□□□ 0.9
SDHAP31040 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.67■□□□□ 0.9
SDHAP31040 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAP31040 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SDHAP31040 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAP31040 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms