Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNFAIP3P21580 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.81■■□□□ 1.56
TNFAIP3P21580 AL592295.1-201ENST00000400984 884 ntBASIC24.81■■□□□ 1.56
TNFAIP3P21580 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
TNFAIP3P21580 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.81■■□□□ 1.56
TNFAIP3P21580 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.81■■□□□ 1.56
TNFAIP3P21580 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TNFAIP3P21580 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNFAIP3P21580 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.81■■□□□ 1.56
TNFAIP3P21580 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
TNFAIP3P21580 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TNFAIP3P21580 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TNFAIP3P21580 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
TNFAIP3P21580 KRT18P60-201ENST00000312876 1297 ntBASIC24.8■■□□□ 1.56
TNFAIP3P21580 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TNFAIP3P21580 ABCB10P4-201ENST00000566803 2184 ntBASIC24.8■■□□□ 1.56
TNFAIP3P21580 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.8■■□□□ 1.56
TNFAIP3P21580 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNFAIP3P21580 AC090877.2-201ENST00000558441 1738 ntBASIC24.79■■□□□ 1.56
TNFAIP3P21580 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.79■■□□□ 1.56
TNFAIP3P21580 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNFAIP3P21580 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.79■■□□□ 1.56
TNFAIP3P21580 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
TNFAIP3P21580 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFAIP3P21580 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.78■■□□□ 1.56
TNFAIP3P21580 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFAIP3P21580 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFAIP3P21580 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TNFAIP3P21580 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFAIP3P21580 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFAIP3P21580 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TNFAIP3P21580 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TNFAIP3P21580 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.77■■□□□ 1.56
TNFAIP3P21580 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TNFAIP3P21580 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TNFAIP3P21580 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TNFAIP3P21580 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TNFAIP3P21580 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
TNFAIP3P21580 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TNFAIP3P21580 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TNFAIP3P21580 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.76■■□□□ 1.55
TNFAIP3P21580 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TNFAIP3P21580 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.76■■□□□ 1.55
TNFAIP3P21580 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TNFAIP3P21580 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
TNFAIP3P21580 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TNFAIP3P21580 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TNFAIP3P21580 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TNFAIP3P21580 LONRF2P2-201ENST00000439212 571 ntBASIC24.75■■□□□ 1.55
TNFAIP3P21580 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TNFAIP3P21580 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.75■■□□□ 1.55
TNFAIP3P21580 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TNFAIP3P21580 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.75■■□□□ 1.55
TNFAIP3P21580 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TNFAIP3P21580 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TNFAIP3P21580 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TNFAIP3P21580 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TNFAIP3P21580 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
TNFAIP3P21580 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.74■■□□□ 1.55
TNFAIP3P21580 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TNFAIP3P21580 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TNFAIP3P21580 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TNFAIP3P21580 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TNFAIP3P21580 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TNFAIP3P21580 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TNFAIP3P21580 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.73■■□□□ 1.55
TNFAIP3P21580 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.72■■□□□ 1.55
TNFAIP3P21580 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.72■■□□□ 1.55
TNFAIP3P21580 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TNFAIP3P21580 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.72■■□□□ 1.55
TNFAIP3P21580 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
TNFAIP3P21580 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.72■■□□□ 1.55
TNFAIP3P21580 ABHD17AP5-201ENST00000580133 923 ntBASIC24.72■■□□□ 1.55
TNFAIP3P21580 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TNFAIP3P21580 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.72■■□□□ 1.55
TNFAIP3P21580 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TNFAIP3P21580 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TNFAIP3P21580 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TNFAIP3P21580 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TNFAIP3P21580 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TNFAIP3P21580 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TNFAIP3P21580 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.7■■□□□ 1.55
TNFAIP3P21580 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TNFAIP3P21580 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.55
TNFAIP3P21580 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.7■■□□□ 1.54
TNFAIP3P21580 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TNFAIP3P21580 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.7■■□□□ 1.54
TNFAIP3P21580 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
TNFAIP3P21580 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
TNFAIP3P21580 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
TNFAIP3P21580 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TNFAIP3P21580 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
TNFAIP3P21580 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TNFAIP3P21580 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TNFAIP3P21580 DUX4L18-201ENST00000553347 1267 ntBASIC24.69■■□□□ 1.54
TNFAIP3P21580 NTF6A-201ENST00000591175 560 ntBASIC24.69■■□□□ 1.54
TNFAIP3P21580 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.69■■□□□ 1.54
TNFAIP3P21580 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
TNFAIP3P21580 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TNFAIP3P21580 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms