Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC1P07992 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC1P07992 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC1P07992 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC1P07992 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC1P07992 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.43■□□□□ 0.86
ERCC1P07992 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC1P07992 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.43■□□□□ 0.86
ERCC1P07992 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.43■□□□□ 0.86
ERCC1P07992 LINC00543-201ENST00000567234 1845 ntBASIC20.43■□□□□ 0.86
ERCC1P07992 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC1P07992 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ERCC1P07992 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.42■□□□□ 0.86
ERCC1P07992 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ERCC1P07992 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ERCC1P07992 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC1P07992 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ERCC1P07992 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC1P07992 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.41■□□□□ 0.86
ERCC1P07992 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.41■□□□□ 0.86
ERCC1P07992 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC1P07992 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC1P07992 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC1P07992 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
ERCC1P07992 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC1P07992 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.4■□□□□ 0.86
ERCC1P07992 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC1P07992 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.4■□□□□ 0.86
ERCC1P07992 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC1P07992 AC022616.5-201ENST00000518796 181 ntBASIC20.4■□□□□ 0.86
ERCC1P07992 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC1P07992 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.39■□□□□ 0.86
ERCC1P07992 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.86
ERCC1P07992 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
ERCC1P07992 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ERCC1P07992 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ERCC1P07992 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC1P07992 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC1P07992 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC1P07992 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC1P07992 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.39■□□□□ 0.85
ERCC1P07992 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC1P07992 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC1P07992 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC1P07992 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.38■□□□□ 0.85
ERCC1P07992 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ERCC1P07992 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.38■□□□□ 0.85
ERCC1P07992 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC1P07992 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.38■□□□□ 0.85
ERCC1P07992 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC1P07992 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC1P07992 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
ERCC1P07992 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC1P07992 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC1P07992 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.38■□□□□ 0.85
ERCC1P07992 AL031848.2-201ENST00000607670 837 ntBASIC20.38■□□□□ 0.85
ERCC1P07992 AL035685.1-201ENST00000636663 812 ntBASIC20.38■□□□□ 0.85
ERCC1P07992 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC1P07992 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC1P07992 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC1P07992 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC1P07992 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ERCC1P07992 LONRF2P2-201ENST00000439212 571 ntBASIC20.37■□□□□ 0.85
ERCC1P07992 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC1P07992 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 AL451085.2-201ENST00000605085 799 ntBASIC20.37■□□□□ 0.85
ERCC1P07992 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ERCC1P07992 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC1P07992 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
ERCC1P07992 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC1P07992 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC1P07992 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.36■□□□□ 0.85
ERCC1P07992 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.36■□□□□ 0.85
ERCC1P07992 PVT1_1.1-201ENST00000615125 194 ntBASIC20.36■□□□□ 0.85
ERCC1P07992 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.36■□□□□ 0.85
ERCC1P07992 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC1P07992 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC1P07992 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC1P07992 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC1P07992 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.35■□□□□ 0.85
ERCC1P07992 AC103834.1-201ENST00000520383 144 ntBASIC20.35■□□□□ 0.85
ERCC1P07992 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ERCC1P07992 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ERCC1P07992 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC1P07992 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC1P07992 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms