Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-2O95096 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
NKX2-2O95096 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-2O95096 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-2O95096 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX2-2O95096 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX2-2O95096 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.52■■□□□ 1.04
NKX2-2O95096 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NKX2-2O95096 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX2-2O95096 KRT18P24-201ENST00000344739 1156 ntBASIC21.52■■□□□ 1.04
NKX2-2O95096 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.52■■□□□ 1.04
NKX2-2O95096 AC120024.1-201ENST00000562672 995 ntBASIC21.52■■□□□ 1.04
NKX2-2O95096 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX2-2O95096 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NKX2-2O95096 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NKX2-2O95096 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NKX2-2O95096 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NKX2-2O95096 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.51■■□□□ 1.03
NKX2-2O95096 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NKX2-2O95096 AC103834.1-201ENST00000520383 144 ntBASIC21.51■■□□□ 1.03
NKX2-2O95096 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.51■■□□□ 1.03
NKX2-2O95096 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.51■■□□□ 1.03
NKX2-2O95096 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NKX2-2O95096 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NKX2-2O95096 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-2O95096 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NKX2-2O95096 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.5■■□□□ 1.03
NKX2-2O95096 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.5■■□□□ 1.03
NKX2-2O95096 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-2O95096 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-2O95096 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
NKX2-2O95096 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.49■■□□□ 1.03
NKX2-2O95096 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-2O95096 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-2O95096 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-2O95096 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-2O95096 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NKX2-2O95096 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.48■■□□□ 1.03
NKX2-2O95096 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-2O95096 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-2O95096 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-2O95096 THA1P-201ENST00000590384 1145 ntBASIC21.48■■□□□ 1.03
NKX2-2O95096 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-2O95096 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-2O95096 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.48■■□□□ 1.03
NKX2-2O95096 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.47■■□□□ 1.03
NKX2-2O95096 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.47■■□□□ 1.03
NKX2-2O95096 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-2O95096 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.46■■□□□ 1.03
NKX2-2O95096 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NKX2-2O95096 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-2O95096 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
NKX2-2O95096 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
NKX2-2O95096 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-2O95096 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NKX2-2O95096 YBX1P4-201ENST00000392794 808 ntBASIC21.45■■□□□ 1.02
NKX2-2O95096 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.45■■□□□ 1.02
NKX2-2O95096 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.45■■□□□ 1.02
NKX2-2O95096 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.45■■□□□ 1.02
NKX2-2O95096 KRT8P33-201ENST00000508125 1423 ntBASIC21.45■■□□□ 1.02
NKX2-2O95096 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-2O95096 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-2O95096 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-2O95096 MIR4281-201ENST00000580852 62 ntBASIC21.44■■□□□ 1.02
NKX2-2O95096 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-2O95096 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-2O95096 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-2O95096 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.44■■□□□ 1.02
NKX2-2O95096 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-2O95096 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-2O95096 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.43■■□□□ 1.02
NKX2-2O95096 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-2O95096 AC103724.3-201ENST00000564481 992 ntBASIC21.43■■□□□ 1.02
NKX2-2O95096 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NKX2-2O95096 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-2O95096 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
NKX2-2O95096 AC004812.2-201ENST00000611079 2094 ntBASIC21.43■■□□□ 1.02
NKX2-2O95096 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-2O95096 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-2O95096 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-2O95096 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.42■■□□□ 1.02
NKX2-2O95096 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-2O95096 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-2O95096 AL161729.1-201ENST00000604104 1402 ntBASIC21.42■■□□□ 1.02
NKX2-2O95096 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.42■■□□□ 1.02
NKX2-2O95096 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NKX2-2O95096 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NKX2-2O95096 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NKX2-2O95096 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.41■■□□□ 1.02
NKX2-2O95096 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.41■■□□□ 1.02
NKX2-2O95096 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms