Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.81■□□□□ 0.92
UPK3AO75631 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
UPK3AO75631 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.81■□□□□ 0.92
UPK3AO75631 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UPK3AO75631 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.81■□□□□ 0.92
UPK3AO75631 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK3AO75631 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UPK3AO75631 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPK3AO75631 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UPK3AO75631 KRT8P33-201ENST00000508125 1423 ntBASIC20.8■□□□□ 0.92
UPK3AO75631 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPK3AO75631 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPK3AO75631 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPK3AO75631 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
UPK3AO75631 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.8■□□□□ 0.92
UPK3AO75631 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.8■□□□□ 0.92
UPK3AO75631 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.8■□□□□ 0.92
UPK3AO75631 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPK3AO75631 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.79■□□□□ 0.92
UPK3AO75631 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPK3AO75631 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
UPK3AO75631 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
UPK3AO75631 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.79■□□□□ 0.92
UPK3AO75631 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPK3AO75631 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPK3AO75631 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK3AO75631 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK3AO75631 AC103834.1-201ENST00000520383 144 ntBASIC20.78■□□□□ 0.92
UPK3AO75631 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
UPK3AO75631 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK3AO75631 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPK3AO75631 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPK3AO75631 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK3AO75631 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK3AO75631 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPK3AO75631 AC141586.4-201ENST00000624558 1573 ntBASIC20.77■□□□□ 0.92
UPK3AO75631 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.77■□□□□ 0.92
UPK3AO75631 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UPK3AO75631 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPK3AO75631 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.77■□□□□ 0.92
UPK3AO75631 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
UPK3AO75631 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UPK3AO75631 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UPK3AO75631 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UPK3AO75631 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK3AO75631 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK3AO75631 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK3AO75631 MIR4508-201ENST00000584178 70 ntBASIC20.76■□□□□ 0.91
UPK3AO75631 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
UPK3AO75631 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.76■□□□□ 0.91
UPK3AO75631 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
UPK3AO75631 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.75■□□□□ 0.91
UPK3AO75631 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
UPK3AO75631 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.75■□□□□ 0.91
UPK3AO75631 AC022616.5-201ENST00000518796 181 ntBASIC20.75■□□□□ 0.91
UPK3AO75631 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.75■□□□□ 0.91
UPK3AO75631 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPK3AO75631 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPK3AO75631 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
UPK3AO75631 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.74■□□□□ 0.91
UPK3AO75631 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPK3AO75631 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPK3AO75631 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPK3AO75631 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPK3AO75631 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
UPK3AO75631 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.74■□□□□ 0.91
UPK3AO75631 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UPK3AO75631 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.74■□□□□ 0.91
UPK3AO75631 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPK3AO75631 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.73■□□□□ 0.91
UPK3AO75631 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.73■□□□□ 0.91
UPK3AO75631 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.73■□□□□ 0.91
UPK3AO75631 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.73■□□□□ 0.91
UPK3AO75631 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK3AO75631 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK3AO75631 YBX1P4-201ENST00000392794 808 ntBASIC20.73■□□□□ 0.91
UPK3AO75631 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.73■□□□□ 0.91
UPK3AO75631 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK3AO75631 MIR6089-201ENST00000616698 64 ntBASIC20.73■□□□□ 0.91
UPK3AO75631 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
UPK3AO75631 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK3AO75631 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK3AO75631 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms