Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CUBNO60494 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.81■□□□□ 0.6
CUBNO60494 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CUBNO60494 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CUBNO60494 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUBNO60494 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.81■□□□□ 0.6
CUBNO60494 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.81■□□□□ 0.6
CUBNO60494 CA15P2-201ENST00000611168 834 ntBASIC18.81■□□□□ 0.6
CUBNO60494 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.8■□□□□ 0.6
CUBNO60494 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.8■□□□□ 0.6
CUBNO60494 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.8■□□□□ 0.6
CUBNO60494 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CUBNO60494 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CUBNO60494 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CUBNO60494 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.8■□□□□ 0.6
CUBNO60494 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CUBNO60494 AP004609.3-201ENST00000610705 1884 ntBASIC18.79■□□□□ 0.6
CUBNO60494 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.79■□□□□ 0.6
CUBNO60494 KRT18P5-201ENST00000436075 1291 ntBASIC18.79■□□□□ 0.6
CUBNO60494 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CUBNO60494 AC027682.1-201ENST00000562846 899 ntBASIC18.79■□□□□ 0.6
CUBNO60494 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.79■□□□□ 0.6
CUBNO60494 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.79■□□□□ 0.6
CUBNO60494 ESRRAP2-201ENST00000418437 1549 ntBASIC18.78■□□□□ 0.6
CUBNO60494 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.78■□□□□ 0.6
CUBNO60494 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CUBNO60494 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CUBNO60494 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CUBNO60494 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CUBNO60494 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CUBNO60494 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CUBNO60494 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CUBNO60494 AC034268.1-201ENST00000441047 882 ntBASIC18.78■□□□□ 0.6
CUBNO60494 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CUBNO60494 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.77■□□□□ 0.6
CUBNO60494 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CUBNO60494 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.77■□□□□ 0.6
CUBNO60494 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.77■□□□□ 0.6
CUBNO60494 HLA-L-209ENST00000420110 1011 ntBASIC18.77■□□□□ 0.6
CUBNO60494 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CUBNO60494 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CUBNO60494 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CUBNO60494 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.77■□□□□ 0.6
CUBNO60494 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CUBNO60494 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CUBNO60494 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CUBNO60494 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CUBNO60494 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CUBNO60494 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.76■□□□□ 0.59
CUBNO60494 SLC47A1P1-202ENST00000449666 945 ntBASIC18.76■□□□□ 0.59
CUBNO60494 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CUBNO60494 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.76■□□□□ 0.59
CUBNO60494 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CUBNO60494 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CUBNO60494 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CUBNO60494 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.76■□□□□ 0.59
CUBNO60494 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.76■□□□□ 0.59
CUBNO60494 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CUBNO60494 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.76■□□□□ 0.59
CUBNO60494 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUBNO60494 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUBNO60494 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.75■□□□□ 0.59
CUBNO60494 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUBNO60494 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.75■□□□□ 0.59
CUBNO60494 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.75■□□□□ 0.59
CUBNO60494 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CUBNO60494 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.75■□□□□ 0.59
CUBNO60494 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.75■□□□□ 0.59
CUBNO60494 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CUBNO60494 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CUBNO60494 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CUBNO60494 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.74■□□□□ 0.59
CUBNO60494 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.74■□□□□ 0.59
CUBNO60494 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.74■□□□□ 0.59
CUBNO60494 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CUBNO60494 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUBNO60494 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUBNO60494 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.74■□□□□ 0.59
CUBNO60494 AL137784.2-201ENST00000607332 1000 ntBASIC18.74■□□□□ 0.59
CUBNO60494 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.74■□□□□ 0.59
CUBNO60494 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUBNO60494 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.74■□□□□ 0.59
CUBNO60494 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.74■□□□□ 0.59
CUBNO60494 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUBNO60494 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUBNO60494 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CUBNO60494 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.73■□□□□ 0.59
CUBNO60494 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.73■□□□□ 0.59
CUBNO60494 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUBNO60494 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUBNO60494 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CUBNO60494 SERBP1P1-201ENST00000396021 1160 ntBASIC18.73■□□□□ 0.59
CUBNO60494 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.73■□□□□ 0.59
CUBNO60494 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.73■□□□□ 0.59
CUBNO60494 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CUBNO60494 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUBNO60494 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUBNO60494 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.72■□□□□ 0.59
CUBNO60494 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CUBNO60494 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms