Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGA12O60330 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PCDHGA12O60330 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.02■■□□□ 1.28
PCDHGA12O60330 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDHGA12O60330 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.02■■□□□ 1.28
PCDHGA12O60330 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA12O60330 AC020928.2-201ENST00000588717 2197 ntBASIC23.01■■□□□ 1.27
PCDHGA12O60330 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA12O60330 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGA12O60330 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGA12O60330 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGA12O60330 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA12O60330 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDHGA12O60330 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA12O60330 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA12O60330 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23■■□□□ 1.27
PCDHGA12O60330 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23■■□□□ 1.27
PCDHGA12O60330 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA12O60330 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA12O60330 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PCDHGA12O60330 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA12O60330 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHGA12O60330 MIR6722-201ENST00000617286 78 ntBASIC22.99■■□□□ 1.27
PCDHGA12O60330 FOXO3B-201ENST00000395675 1928 ntBASIC22.99■■□□□ 1.27
PCDHGA12O60330 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA12O60330 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA12O60330 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA12O60330 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PCDHGA12O60330 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA12O60330 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA12O60330 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA12O60330 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA12O60330 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA12O60330 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA12O60330 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHGA12O60330 AC106739.1-201ENST00000617035 715 ntBASIC22.98■■□□□ 1.27
PCDHGA12O60330 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PCDHGA12O60330 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PCDHGA12O60330 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHGA12O60330 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA12O60330 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA12O60330 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PCDHGA12O60330 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.97■■□□□ 1.27
PCDHGA12O60330 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.97■■□□□ 1.27
PCDHGA12O60330 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.97■■□□□ 1.27
PCDHGA12O60330 AC145676.1-201ENST00000514988 2004 ntBASIC22.97■■□□□ 1.27
PCDHGA12O60330 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PCDHGA12O60330 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA12O60330 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA12O60330 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA12O60330 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGA12O60330 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PCDHGA12O60330 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA12O60330 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA12O60330 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGA12O60330 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGA12O60330 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGA12O60330 SNX5-217ENST00000606557 1087 ntBASIC22.95■■□□□ 1.26
PCDHGA12O60330 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGA12O60330 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.94■■□□□ 1.26
PCDHGA12O60330 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHGA12O60330 PBX2P1-201ENST00000493219 1291 ntBASIC22.94■■□□□ 1.26
PCDHGA12O60330 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA12O60330 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA12O60330 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.93■■□□□ 1.26
PCDHGA12O60330 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
PCDHGA12O60330 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA12O60330 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA12O60330 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA12O60330 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PCDHGA12O60330 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA12O60330 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
PCDHGA12O60330 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.92■■□□□ 1.26
PCDHGA12O60330 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA12O60330 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA12O60330 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGA12O60330 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGA12O60330 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA12O60330 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA12O60330 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGA12O60330 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA12O60330 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.91■■□□□ 1.26
PCDHGA12O60330 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGA12O60330 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA12O60330 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA12O60330 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGA12O60330 AC090877.2-201ENST00000558441 1738 ntBASIC22.91■■□□□ 1.26
PCDHGA12O60330 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA12O60330 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA12O60330 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA12O60330 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHGA12O60330 AC142381.2-201ENST00000566120 298 ntBASIC22.9■■□□□ 1.26
PCDHGA12O60330 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms