Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PRKNO60260 AF131216.4-201ENST00000638924 1588 ntBASIC21.65■■□□□ 1.06
PRKNO60260 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRKNO60260 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRKNO60260 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PRKNO60260 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.64■■□□□ 1.05
PRKNO60260 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRKNO60260 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRKNO60260 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRKNO60260 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRKNO60260 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRKNO60260 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRKNO60260 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRKNO60260 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.63■■□□□ 1.05
PRKNO60260 MIR4787-201ENST00000607364 84 ntBASIC21.63■■□□□ 1.05
PRKNO60260 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRKNO60260 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRKNO60260 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRKNO60260 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRKNO60260 AC021242.3-201ENST00000607598 1377 ntBASIC21.62■■□□□ 1.05
PRKNO60260 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
PRKNO60260 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PRKNO60260 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.62■■□□□ 1.05
PRKNO60260 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.62■■□□□ 1.05
PRKNO60260 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.62■■□□□ 1.05
PRKNO60260 KRT125P-201ENST00000546827 989 ntBASIC21.62■■□□□ 1.05
PRKNO60260 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRKNO60260 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.62■■□□□ 1.05
PRKNO60260 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.62■■□□□ 1.05
PRKNO60260 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRKNO60260 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.62■■□□□ 1.05
PRKNO60260 AC142381.3-201ENST00000568208 1670 ntBASIC21.62■■□□□ 1.05
PRKNO60260 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRKNO60260 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.61■■□□□ 1.05
PRKNO60260 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRKNO60260 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRKNO60260 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.61■■□□□ 1.05
PRKNO60260 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.61■■□□□ 1.05
PRKNO60260 MIR6089-201ENST00000616698 64 ntBASIC21.61■■□□□ 1.05
PRKNO60260 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRKNO60260 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRKNO60260 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.61■■□□□ 1.05
PRKNO60260 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PRKNO60260 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.6■■□□□ 1.05
PRKNO60260 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.6■■□□□ 1.05
PRKNO60260 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRKNO60260 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.6■■□□□ 1.05
PRKNO60260 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PRKNO60260 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRKNO60260 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRKNO60260 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRKNO60260 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRKNO60260 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRKNO60260 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.59■■□□□ 1.05
PRKNO60260 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRKNO60260 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.59■■□□□ 1.05
PRKNO60260 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.59■■□□□ 1.05
PRKNO60260 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.59■■□□□ 1.05
PRKNO60260 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRKNO60260 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRKNO60260 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRKNO60260 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRKNO60260 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.58■■□□□ 1.05
PRKNO60260 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.58■■□□□ 1.05
PRKNO60260 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRKNO60260 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRKNO60260 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.58■■□□□ 1.04
PRKNO60260 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRKNO60260 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.57■■□□□ 1.04
PRKNO60260 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRKNO60260 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
PRKNO60260 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRKNO60260 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRKNO60260 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRKNO60260 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.56■■□□□ 1.04
PRKNO60260 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.56■■□□□ 1.04
PRKNO60260 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRKNO60260 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRKNO60260 HLA-L-211ENST00000482052 1765 ntBASIC21.56■■□□□ 1.04
PRKNO60260 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRKNO60260 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PRKNO60260 UNC93B8-201ENST00000511903 705 ntBASIC21.55■■□□□ 1.04
PRKNO60260 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRKNO60260 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRKNO60260 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PRKNO60260 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRKNO60260 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
PRKNO60260 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.54■■□□□ 1.04
PRKNO60260 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRKNO60260 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.54■■□□□ 1.04
PRKNO60260 AC092028.1-203ENST00000608262 953 ntBASIC21.54■■□□□ 1.04
PRKNO60260 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRKNO60260 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.54■■□□□ 1.04
PRKNO60260 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRKNO60260 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRKNO60260 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
PRKNO60260 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRKNO60260 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.53■■□□□ 1.04
PRKNO60260 TSPY9P-201ENST00000440215 945 ntBASIC21.53■■□□□ 1.04
PRKNO60260 TSPY11P-201ENST00000442607 1045 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms