Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NDUFB3O43676 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 BX664725.1-201ENST00000438252 379 ntBASIC19.35■□□□□ 0.69
NDUFB3O43676 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
NDUFB3O43676 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.35■□□□□ 0.69
NDUFB3O43676 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.34■□□□□ 0.69
NDUFB3O43676 AC009299.2-201ENST00000482477 511 ntBASIC19.34■□□□□ 0.69
NDUFB3O43676 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NDUFB3O43676 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NDUFB3O43676 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NDUFB3O43676 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NDUFB3O43676 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NDUFB3O43676 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NDUFB3O43676 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFB3O43676 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.33■□□□□ 0.68
NDUFB3O43676 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFB3O43676 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NDUFB3O43676 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 KRT125P-201ENST00000546827 989 ntBASIC19.32■□□□□ 0.68
NDUFB3O43676 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.32■□□□□ 0.68
NDUFB3O43676 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.32■□□□□ 0.68
NDUFB3O43676 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 AC137630.3-201ENST00000607245 391 ntBASIC19.32■□□□□ 0.68
NDUFB3O43676 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.32■□□□□ 0.68
NDUFB3O43676 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFB3O43676 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFB3O43676 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFB3O43676 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.31■□□□□ 0.68
NDUFB3O43676 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFB3O43676 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFB3O43676 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFB3O43676 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NDUFB3O43676 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
NDUFB3O43676 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.3■□□□□ 0.68
NDUFB3O43676 Z92544.1-202ENST00000571933 1220 ntBASIC19.3■□□□□ 0.68
NDUFB3O43676 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFB3O43676 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFB3O43676 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFB3O43676 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
NDUFB3O43676 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFB3O43676 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFB3O43676 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.29■□□□□ 0.68
NDUFB3O43676 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.29■□□□□ 0.68
NDUFB3O43676 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFB3O43676 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFB3O43676 AL035685.1-201ENST00000636663 812 ntBASIC19.29■□□□□ 0.68
NDUFB3O43676 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFB3O43676 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFB3O43676 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.28■□□□□ 0.68
NDUFB3O43676 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NDUFB3O43676 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFB3O43676 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFB3O43676 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.28■□□□□ 0.68
NDUFB3O43676 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFB3O43676 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NDUFB3O43676 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFB3O43676 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFB3O43676 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.27■□□□□ 0.68
NDUFB3O43676 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFB3O43676 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NDUFB3O43676 AC239859.2-201ENST00000444165 318 ntBASIC19.27■□□□□ 0.68
NDUFB3O43676 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.27■□□□□ 0.68
NDUFB3O43676 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.27■□□□□ 0.67
NDUFB3O43676 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
NDUFB3O43676 HLA-L-211ENST00000482052 1765 ntBASIC19.27■□□□□ 0.67
NDUFB3O43676 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFB3O43676 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFB3O43676 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.26■□□□□ 0.67
NDUFB3O43676 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.26■□□□□ 0.67
NDUFB3O43676 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFB3O43676 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.26■□□□□ 0.67
NDUFB3O43676 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.26■□□□□ 0.67
NDUFB3O43676 AF131216.4-201ENST00000638924 1588 ntBASIC19.26■□□□□ 0.67
NDUFB3O43676 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFB3O43676 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFB3O43676 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFB3O43676 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.26■□□□□ 0.67
NDUFB3O43676 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NDUFB3O43676 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFB3O43676 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFB3O43676 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms