Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LINC01548A6NM66 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01548A6NM66 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01548A6NM66 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01548A6NM66 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01548A6NM66 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01548A6NM66 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01548A6NM66 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01548A6NM66 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01548A6NM66 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.36■□□□□ 0.53
LINC01548A6NM66 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01548A6NM66 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01548A6NM66 Z92544.1-202ENST00000571933 1220 ntBASIC18.36■□□□□ 0.53
LINC01548A6NM66 AC021242.3-201ENST00000607598 1377 ntBASIC18.36■□□□□ 0.53
LINC01548A6NM66 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01548A6NM66 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01548A6NM66 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LINC01548A6NM66 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC01548A6NM66 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.35■□□□□ 0.53
LINC01548A6NM66 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.35■□□□□ 0.53
LINC01548A6NM66 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC01548A6NM66 MIR4787-201ENST00000607364 84 ntBASIC18.35■□□□□ 0.53
LINC01548A6NM66 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LINC01548A6NM66 HLA-L-211ENST00000482052 1765 ntBASIC18.35■□□□□ 0.53
LINC01548A6NM66 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01548A6NM66 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01548A6NM66 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LINC01548A6NM66 KRT125P-201ENST00000546827 989 ntBASIC18.34■□□□□ 0.53
LINC01548A6NM66 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.34■□□□□ 0.53
LINC01548A6NM66 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01548A6NM66 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01548A6NM66 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.33■□□□□ 0.53
LINC01548A6NM66 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01548A6NM66 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.33■□□□□ 0.52
LINC01548A6NM66 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.33■□□□□ 0.52
LINC01548A6NM66 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC01548A6NM66 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC01548A6NM66 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC01548A6NM66 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01548A6NM66 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01548A6NM66 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01548A6NM66 AP003733.4-201ENST00000623785 1697 ntBASIC18.32■□□□□ 0.52
LINC01548A6NM66 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LINC01548A6NM66 GUSBP5-201ENST00000418136 578 ntBASIC18.32■□□□□ 0.52
LINC01548A6NM66 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01548A6NM66 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
LINC01548A6NM66 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01548A6NM66 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LINC01548A6NM66 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01548A6NM66 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LINC01548A6NM66 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01548A6NM66 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01548A6NM66 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01548A6NM66 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01548A6NM66 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC01548A6NM66 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01548A6NM66 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01548A6NM66 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LINC01548A6NM66 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.3■□□□□ 0.52
LINC01548A6NM66 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01548A6NM66 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01548A6NM66 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01548A6NM66 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.3■□□□□ 0.52
LINC01548A6NM66 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01548A6NM66 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01548A6NM66 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01548A6NM66 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01548A6NM66 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC01548A6NM66 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01548A6NM66 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01548A6NM66 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01548A6NM66 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01548A6NM66 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01548A6NM66 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01548A6NM66 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms