Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM88BA6NKF7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM88BA6NKF7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM88BA6NKF7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
TMEM88BA6NKF7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM88BA6NKF7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 AC099791.2-201ENST00000605725 427 ntBASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TMEM88BA6NKF7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 AC005703.6-201ENST00000623265 1329 ntBASIC27.61■■■□□ 2.01
TMEM88BA6NKF7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TMEM88BA6NKF7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.6■■■□□ 2.01
TMEM88BA6NKF7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.6■■■□□ 2.01
TMEM88BA6NKF7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
TMEM88BA6NKF7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
TMEM88BA6NKF7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM88BA6NKF7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.59■■■□□ 2.01
TMEM88BA6NKF7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.58■■■□□ 2.01
TMEM88BA6NKF7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TMEM88BA6NKF7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TMEM88BA6NKF7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.58■■■□□ 2.01
TMEM88BA6NKF7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TMEM88BA6NKF7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.58■■■□□ 2.01
TMEM88BA6NKF7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2
TMEM88BA6NKF7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM88BA6NKF7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMEM88BA6NKF7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM88BA6NKF7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMEM88BA6NKF7 AC233992.3-201ENST00000607491 485 ntBASIC27.57■■■□□ 2
TMEM88BA6NKF7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.57■■■□□ 2
TMEM88BA6NKF7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.57■■■□□ 2
TMEM88BA6NKF7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TMEM88BA6NKF7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM88BA6NKF7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.56■■■□□ 2
TMEM88BA6NKF7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.56■■■□□ 2
TMEM88BA6NKF7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
TMEM88BA6NKF7 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.56■■■□□ 2
TMEM88BA6NKF7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
TMEM88BA6NKF7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.56■■■□□ 2
TMEM88BA6NKF7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.56■■■□□ 2
TMEM88BA6NKF7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM88BA6NKF7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.56■■■□□ 2
TMEM88BA6NKF7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
TMEM88BA6NKF7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMEM88BA6NKF7 FOXO3B-201ENST00000395675 1928 ntBASIC27.55■■■□□ 2
TMEM88BA6NKF7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.55■■■□□ 2
TMEM88BA6NKF7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.55■■■□□ 2
TMEM88BA6NKF7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMEM88BA6NKF7 AC090877.2-201ENST00000558441 1738 ntBASIC27.55■■■□□ 2
TMEM88BA6NKF7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
TMEM88BA6NKF7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
TMEM88BA6NKF7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TMEM88BA6NKF7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM88BA6NKF7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM88BA6NKF7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.54■■■□□ 2
TMEM88BA6NKF7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.53■■■□□ 2
TMEM88BA6NKF7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
TMEM88BA6NKF7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.53■■■□□ 2
TMEM88BA6NKF7 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.53■■■□□ 2
TMEM88BA6NKF7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
TMEM88BA6NKF7 AC136469.2-201ENST00000623944 1028 ntBASIC27.53■■■□□ 2
TMEM88BA6NKF7 AC142472.1-201ENST00000612013 1741 ntBASIC27.53■■■□□ 2
TMEM88BA6NKF7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
TMEM88BA6NKF7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TMEM88BA6NKF7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
TMEM88BA6NKF7 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.52■■■□□ 2
TMEM88BA6NKF7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.52■■■□□ 2
TMEM88BA6NKF7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
TMEM88BA6NKF7 ABHD17AP1-201ENST00000358206 933 ntBASIC27.51■■□□□ 1.99
TMEM88BA6NKF7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMEM88BA6NKF7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.51■■□□□ 1.99
TMEM88BA6NKF7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TMEM88BA6NKF7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMEM88BA6NKF7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
TMEM88BA6NKF7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.5■■□□□ 1.99
TMEM88BA6NKF7 BX842568.3-201ENST00000418104 571 ntBASIC27.5■■□□□ 1.99
TMEM88BA6NKF7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMEM88BA6NKF7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM88BA6NKF7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM88BA6NKF7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.49■■□□□ 1.99
TMEM88BA6NKF7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.49■■□□□ 1.99
TMEM88BA6NKF7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.49■■□□□ 1.99
TMEM88BA6NKF7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.49■■□□□ 1.99
TMEM88BA6NKF7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM88BA6NKF7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM88BA6NKF7 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.48■■□□□ 1.99
TMEM88BA6NKF7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.48■■□□□ 1.99
TMEM88BA6NKF7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.48■■□□□ 1.99
TMEM88BA6NKF7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms