Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMCO2A6NFE2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMCO2A6NFE2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
SMCO2A6NFE2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.69■■□□□ 1.86
SMCO2A6NFE2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMCO2A6NFE2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMCO2A6NFE2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.68■■□□□ 1.86
SMCO2A6NFE2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMCO2A6NFE2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMCO2A6NFE2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SMCO2A6NFE2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.68■■□□□ 1.86
SMCO2A6NFE2 HLA-L-211ENST00000482052 1765 ntBASIC26.68■■□□□ 1.86
SMCO2A6NFE2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMCO2A6NFE2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
SMCO2A6NFE2 AC021242.3-201ENST00000607598 1377 ntBASIC26.67■■□□□ 1.86
SMCO2A6NFE2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SMCO2A6NFE2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.66■■□□□ 1.86
SMCO2A6NFE2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMCO2A6NFE2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.66■■□□□ 1.86
SMCO2A6NFE2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMCO2A6NFE2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SMCO2A6NFE2 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.65■■□□□ 1.86
SMCO2A6NFE2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMCO2A6NFE2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMCO2A6NFE2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMCO2A6NFE2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.64■■□□□ 1.86
SMCO2A6NFE2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.64■■□□□ 1.86
SMCO2A6NFE2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.64■■□□□ 1.86
SMCO2A6NFE2 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.64■■□□□ 1.86
SMCO2A6NFE2 KRT125P-201ENST00000546827 989 ntBASIC26.64■■□□□ 1.86
SMCO2A6NFE2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.64■■□□□ 1.86
SMCO2A6NFE2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SMCO2A6NFE2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SMCO2A6NFE2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SMCO2A6NFE2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 MIR4787-201ENST00000607364 84 ntBASIC26.62■■□□□ 1.85
SMCO2A6NFE2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.62■■□□□ 1.85
SMCO2A6NFE2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMCO2A6NFE2 AC135731.1-201ENST00000569415 2548 ntBASIC26.61■■□□□ 1.85
SMCO2A6NFE2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.6■■□□□ 1.85
SMCO2A6NFE2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SMCO2A6NFE2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.6■■□□□ 1.85
SMCO2A6NFE2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.6■■□□□ 1.85
SMCO2A6NFE2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMCO2A6NFE2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMCO2A6NFE2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMCO2A6NFE2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
SMCO2A6NFE2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.59■■□□□ 1.85
SMCO2A6NFE2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.59■■□□□ 1.85
SMCO2A6NFE2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMCO2A6NFE2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMCO2A6NFE2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.58■■□□□ 1.85
SMCO2A6NFE2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SMCO2A6NFE2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.58■■□□□ 1.85
SMCO2A6NFE2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.57■■□□□ 1.84
SMCO2A6NFE2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.57■■□□□ 1.84
SMCO2A6NFE2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SMCO2A6NFE2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMCO2A6NFE2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SMCO2A6NFE2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SMCO2A6NFE2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMCO2A6NFE2 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.56■■□□□ 1.84
SMCO2A6NFE2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMCO2A6NFE2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMCO2A6NFE2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMCO2A6NFE2 GUSBP5-201ENST00000418136 578 ntBASIC26.56■■□□□ 1.84
SMCO2A6NFE2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMCO2A6NFE2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMCO2A6NFE2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 AC092028.1-203ENST00000608262 953 ntBASIC26.55■■□□□ 1.84
SMCO2A6NFE2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMCO2A6NFE2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms