Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 MIR6765-201ENST00000614092 87 ntBASIC16.36■□□□□ 0.21
TRBV10-1A0A0K0K1A3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV10-1A0A0K0K1A3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV10-1A0A0K0K1A3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV10-1A0A0K0K1A3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 AL592293.1-201ENST00000502889 1188 ntBASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 AC090877.2-201ENST00000558441 1738 ntBASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV10-1A0A0K0K1A3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV10-1A0A0K0K1A3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.33■□□□□ 0.21
TRBV10-1A0A0K0K1A3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV10-1A0A0K0K1A3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV10-1A0A0K0K1A3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV10-1A0A0K0K1A3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV10-1A0A0K0K1A3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV10-1A0A0K0K1A3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 ABCB10P4-201ENST00000566803 2184 ntBASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV10-1A0A0K0K1A3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RARRES2P2-201ENST00000394842 485 ntBASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV10-1A0A0K0K1A3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 DUSP8P5-201ENST00000422884 1815 ntBASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 SPCS2P3-201ENST00000500401 656 ntBASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV10-1A0A0K0K1A3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms