Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 AC011551.1-201ENST00000614101 683 ntBASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV20A0A0B4J274 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 UNC93B8-201ENST00000511903 705 ntBASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 MIR4281-201ENST00000580852 62 ntBASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 AL024507.2-201ENST00000606070 2574 ntBASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV20A0A0B4J274 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRAV20A0A0B4J274 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV20A0A0B4J274 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV20A0A0B4J274 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV20A0A0B4J274 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV20A0A0B4J274 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 AC008406.3-201ENST00000620001 1374 ntBASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV20A0A0B4J274 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 TSPY9P-201ENST00000440215 945 ntBASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 TSPY11P-201ENST00000442607 1045 ntBASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.53■□□□□ 0.72
TRAV20A0A0B4J274 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 AC092028.1-203ENST00000608262 953 ntBASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV20A0A0B4J274 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV20A0A0B4J274 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV20A0A0B4J274 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV20A0A0B4J274 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV20A0A0B4J274 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV20A0A0B4J274 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 AC019069.1-201ENST00000610008 1333 ntBASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 AC020928.2-201ENST00000588717 2197 ntBASIC19.49■□□□□ 0.71
TRAV20A0A0B4J274 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms