Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L13-201ENST00000554103 1267 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L15-201ENST00000611059 1267 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L23-201ENST00000615195 1269 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L24-201ENST00000617576 1269 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 LINC01971-201ENST00000617888 1048 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L22-201ENST00000618238 1269 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L20-201ENST00000619712 1269 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L21-201ENST00000622058 1269 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L10-201ENST00000622460 1267 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 DUX4L25-201ENST00000624915 1269 ntBASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 HLA-V-202ENST00000446817 847 ntBASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV34A0A0B4J273 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV34A0A0B4J273 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV34A0A0B4J273 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV34A0A0B4J273 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV34A0A0B4J273 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV34A0A0B4J273 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TRAV34A0A0B4J273 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV34A0A0B4J273 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV34A0A0B4J273 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAV34A0A0B4J273 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV34A0A0B4J273 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAV34A0A0B4J273 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRAV34A0A0B4J273 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV34A0A0B4J273 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRAV34A0A0B4J273 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV34A0A0B4J273 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV34A0A0B4J273 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV34A0A0B4J273 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms