Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AC026202.3-201ENST00000600805 1127 ntBASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AP003733.4-201ENST00000623785 1697 ntBASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 KRT18P10-201ENST00000388836 1287 ntBASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RAP2CP1-202ENST00000605179 643 ntBASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AC009831.1-201ENST00000580420 1582 ntBASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 NTF6A-201ENST00000591175 560 ntBASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AC079834.2-201ENST00000609776 1949 ntBASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms