Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 IKBKGP1-201ENST00000612193 1073 ntBASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 AL118506.1-201ENST00000601296 3082 ntBASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAPPC1Q9Y5R8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 INGX-201ENST00000359239 846 ntBASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PMS2P1-201ENST00000431037 1228 ntBASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 EGLN1P1-201ENST00000531623 762 ntBASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AC005336.2-201ENST00000593183 939 ntBASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms